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The map label for this gene is dedA [C]

Identifier: 221229542

GI number: 221229542

Start: 368465

End: 369133

Strand: Direct

Name: dedA [C]

Synonym: MLBr_00287

Alternate gene names: 221229542

Gene position: 368465-369133 (Clockwise)

Preceding gene: 221229540

Following gene: 221229546

Centisome position: 11.27

GC content: 58.0

Gene sequence:

>669_bases
ATGAACACCGCCATAGTGGCCTTGCCGCCCACCCTCGACCCGATGTTCTGGATTGGTCCCGAGGGCTTTTTCGCGGCGGC
GATGCTTCCCGCCACCCTGGTCATCATCTTCGTCGAAACCGGCTTGCTGTTCCCATTGCTACCTGGCGAATCACTGCTGT
TCACCGGGGGGCTGTTGGCCACTAAGGGGACGATCGATATCTGGGTGTTGTCCCCTTCCGTAGCGGTGGTAGCGGTATTA
GGCGATCAGATCGGGTATCTCATCGGTCGGCGCATCGGCCCCGCACTGTTCAAGAAAGAAAATTCACGCTTCTTCAAGCA
GCACTACGTAACCGAGTCGCACGCCTTCTTCGAGAAGCACGGGCGATGGACGATCATCCTAGCCCGTTTCTTGCCGTTCA
TGCGGACGTTCACCCCGGTGATCGCGGGCTTATCCTATATGAGTTATCCATTGTATCTGGGGTTCGACATCGTGGGCGGC
ATCCTCTGGGGCGGAGGCGTCACGGTTGCCGGCTACTTCCTGGGCAACGTGCCGTTCGTCCGCCAGAATTTAGAGAAAAT
CATCCTGGGCATTCTATTCGTGTCACTGCTGCCAGCGCTGATTGCGGCCTGGCACGGCTATCGGTCGCAGAGCCGAACAG
CCAAAAGCGAACTCGCCTTACCAGACTGA

Upstream 100 bases:

>100_bases
GTATCGCAACATCCCAATGCCGGTTAGCAGCCAATCTGCGCAGGATTTTTTGTCCACAGCCAGCAGAGGCTACGTGTTTC
GGTCGGTATGTTGTGACGTC

Downstream 100 bases:

>100_bases
ACCCAAGCAGCTAGTGGTGGGTGGTTTTGAGGCGTTTAGGTGTGGTTGGTTGAGGTAAGTGGGCGGTGTATGTGGTTGCT
GTCTTGGAGTTGCGCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNTAIVALPPTLDPMFWIGPEGFFAAAMLPATLVIIFVETGLLFPLLPGESLLFTGGLLATKGTIDIWVLSPSVAVVAVL
GDQIGYLIGRRIGPALFKKENSRFFKQHYVTESHAFFEKHGRWTIILARFLPFMRTFTPVIAGLSYMSYPLYLGFDIVGG
ILWGGGVTVAGYFLGNVPFVRQNLEKIILGILFVSLLPALIAAWHGYRSQSRTAKSELALPD

Sequences:

>Translated_222_residues
MNTAIVALPPTLDPMFWIGPEGFFAAAMLPATLVIIFVETGLLFPLLPGESLLFTGGLLATKGTIDIWVLSPSVAVVAVL
GDQIGYLIGRRIGPALFKKENSRFFKQHYVTESHAFFEKHGRWTIILARFLPFMRTFTPVIAGLSYMSYPLYLGFDIVGG
ILWGGGVTVAGYFLGNVPFVRQNLEKIILGILFVSLLPALIAAWHGYRSQSRTAKSELALPD
>Mature_222_residues
MNTAIVALPPTLDPMFWIGPEGFFAAAMLPATLVIIFVETGLLFPLLPGESLLFTGGLLATKGTIDIWVLSPSVAVVAVL
GDQIGYLIGRRIGPALFKKENSRFFKQHYVTESHAFFEKHGRWTIILARFLPFMRTFTPVIAGLSYMSYPLYLGFDIVGG
ILWGGGVTVAGYFLGNVPFVRQNLEKIILGILFVSLLPALIAAWHGYRSQSRTAKSELALPD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family

Homologues:

Organism=Escherichia coli, GI1788656, Length=171, Percent_Identity=45.6140350877193, Blast_Score=154, Evalue=4e-39,
Organism=Escherichia coli, GI1789481, Length=146, Percent_Identity=36.3013698630137, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789384, Length=167, Percent_Identity=32.3353293413174, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y287_MYCLE (O69601)

Other databases:

- EMBL:   AL023514
- EMBL:   AL583918
- PIR:   G86944
- RefSeq:   NP_301327.1
- EnsemblBacteria:   EBMYCT00000028249
- GeneID:   908826
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML0287
- NMPDR:   fig|272631.1.peg.199
- Leproma:   ML0287
- GeneTree:   EBGT00050000017505
- HOGENOM:   HBG657460
- OMA:   YARHGGK
- ProtClustDB:   CLSK790464
- BioCyc:   MLEP272631:ML0287-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 24348; Mature: 24348

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x22865380)-; HASH(0x21a1d9f8)-; HASH(0xb8e6344)-; HASH(0x2216bd94)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAIVALPPTLDPMFWIGPEGFFAAAMLPATLVIIFVETGLLFPLLPGESLLFTGGLLA
CCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCEEE
TKGTIDIWVLSPSVAVVAVLGDQIGYLIGRRIGPALFKKENSRFFKQHYVTESHAFFEKH
ECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHCCHHHHHHHHC
GRWTIILARFLPFMRTFTPVIAGLSYMSYPLYLGFDIVGGILWGGGVTVAGYFLGNVPFV
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHH
RQNLEKIILGILFVSLLPALIAAWHGYRSQSRTAKSELALPD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCH
>Mature Secondary Structure
MNTAIVALPPTLDPMFWIGPEGFFAAAMLPATLVIIFVETGLLFPLLPGESLLFTGGLLA
CCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCEEE
TKGTIDIWVLSPSVAVVAVLGDQIGYLIGRRIGPALFKKENSRFFKQHYVTESHAFFEKH
ECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHCCHHHHHHHHC
GRWTIILARFLPFMRTFTPVIAGLSYMSYPLYLGFDIVGGILWGGGVTVAGYFLGNVPFV
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHH
RQNLEKIILGILFVSLLPALIAAWHGYRSQSRTAKSELALPD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002