| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229514
Identifier: 221229514
GI number: 221229514
Start: 314964
End: 316091
Strand: Direct
Name: 221229514
Synonym: MLBr_00240
Alternate gene names: NA
Gene position: 314964-316091 (Clockwise)
Preceding gene: 221229513
Following gene: 221229515
Centisome position: 9.64
GC content: 61.61
Gene sequence:
>1128_bases TTGAACGTACTAACGAGGCTCCATGAGACCTCGTCGCCGATATTCCGGCTTGTAGTTGGGGTGCTGCTTTTGGTCATCGC GTTCGCTGGTGGCTACGCGGTCGCCGCGTACAAGACGGTGACATTGACTGTCGACGGAACCCCGATGCAGGTGATGACCA TGAAATCACGGGTGATTGACATCATTCAGGAGAACGGGTTCGCCGTCGGCGAGTGTGACGACCTGTATCCTGCCGCTGAT GTGTCGGTTCATGCCACCGACAACATCGTGTTGCGGCGCAGCAGACCACTACAGATTTCTCTGGATGGTAAGGACATCCA ACAGGTTTGGACGACGGCATCCACTGTGGACGAGGCGCTGGTCCAGCTTGCGCTGACCGACACGGCTCCCATCGTGGCTT CTCGTGGCAGCCGTGTTCCACTGACTGGGATGGCGCTGCCTGTCGTCAGCGCCAAAACGGTCCAGATCAACGATGGCGGT GCGGTGCGCATGGTGCACTTGCCGGCGTCGAATGTCGGAGGGTTGCTGGCCGCTGTCGGTATTCCACTGCTAGCGAGCGA TCAGGTGTCGCCGAGTGCGACCTCGCCGATAGTGGAAGGTATGCAGATCCAGGTGACCCGCAACCGCATCGAAAGAGTCA TCGAGCGAATTCCGTTACCCCCGAGTTCCCGTAGTATCGAGGACCCGGAGATGAACATCAGCCGTGTGGTTGTCGAGGAC CCGGGCACCCCCGGCACACAGGATGTGACGTTCGCGGTGGCCACAGTAAACGGTGTCGAGACCGGCCGGCTGCCCGTCGC CAACGTGGTGGTGGAGCCGGCCCGCGAATCGGTCATCCGGGTGGGTACCAAGCCCGGTACTGAGGTGCCCCCCGTTAGCG ACGGGTCTATCTGGGACGCCATTGCGGGTTGCGAGGCCGGTGGGAACTGGGCGATCAACACTGGTAACGGGTATTACGGC GGTGTCCAGTTCGACCAGGGCACTTGGGTGGCCAACGGCGGCTTGCGGTATGCTCCCCGTGCTGACCTTGCCACCCGAGA AGAGCAGATCGCGGTTGCTGAGGTGACGCGGGCGCGCCAAGGATGGGATGCTTGGCCAGTGTGCAGCGGAAGAGTGGGTG CACACTGA
Upstream 100 bases:
>100_bases TTGAGGTGGTTCTGTTGAAGCTCAAAATATTTTTGTAATTTTTTGAGTCAAGCCAAAAAGGTCGATGATATTTGGTTTCT GAGGTCGGGGTAGGCGAGCG
Downstream 100 bases:
>100_bases CCATCCGGCTACTCGAGCGTACCGAGATCAGGTGGCTGGTAAAAGAACTTGAATGTCGGCCACGGAAATCTCTCGGCCAA AATTTCGTGCACGACGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; G5 Domain-Containing Protein; Transglycosylase Family Protein; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; 3D Domain-Containing Protein; G5 Domain Protein; 3D Domain Protein; Transglycosylase-Like Domain Protein; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; Resuscitation-Promoting Factor RpfE; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; Secreted Transglycosydase; Resuscitation-Promoting Factor Rpfb; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Transglycosylase Domain Containing Protein; Vegetative Cell Wall; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Cell Wall Function Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; Lipoprotein; M24/M37 Family Peptidase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNVLTRLHETSSPIFRLVVGVLLLVIAFAGGYAVAAYKTVTLTVDGTPMQVMTMKSRVIDIIQENGFAVGECDDLYPAAD VSVHATDNIVLRRSRPLQISLDGKDIQQVWTTASTVDEALVQLALTDTAPIVASRGSRVPLTGMALPVVSAKTVQINDGG AVRMVHLPASNVGGLLAAVGIPLLASDQVSPSATSPIVEGMQIQVTRNRIERVIERIPLPPSSRSIEDPEMNISRVVVED PGTPGTQDVTFAVATVNGVETGRLPVANVVVEPARESVIRVGTKPGTEVPPVSDGSIWDAIAGCEAGGNWAINTGNGYYG GVQFDQGTWVANGGLRYAPRADLATREEQIAVAEVTRARQGWDAWPVCSGRVGAH
Sequences:
>Translated_375_residues MNVLTRLHETSSPIFRLVVGVLLLVIAFAGGYAVAAYKTVTLTVDGTPMQVMTMKSRVIDIIQENGFAVGECDDLYPAAD VSVHATDNIVLRRSRPLQISLDGKDIQQVWTTASTVDEALVQLALTDTAPIVASRGSRVPLTGMALPVVSAKTVQINDGG AVRMVHLPASNVGGLLAAVGIPLLASDQVSPSATSPIVEGMQIQVTRNRIERVIERIPLPPSSRSIEDPEMNISRVVVED PGTPGTQDVTFAVATVNGVETGRLPVANVVVEPARESVIRVGTKPGTEVPPVSDGSIWDAIAGCEAGGNWAINTGNGYYG GVQFDQGTWVANGGLRYAPRADLATREEQIAVAEVTRARQGWDAWPVCSGRVGAH >Mature_375_residues MNVLTRLHETSSPIFRLVVGVLLLVIAFAGGYAVAAYKTVTLTVDGTPMQVMTMKSRVIDIIQENGFAVGECDDLYPAAD VSVHATDNIVLRRSRPLQISLDGKDIQQVWTTASTVDEALVQLALTDTAPIVASRGSRVPLTGMALPVVSAKTVQINDGG AVRMVHLPASNVGGLLAAVGIPLLASDQVSPSATSPIVEGMQIQVTRNRIERVIERIPLPPSSRSIEDPEMNISRVVVED PGTPGTQDVTFAVATVNGVETGRLPVANVVVEPARESVIRVGTKPGTEVPPVSDGSIWDAIAGCEAGGNWAINTGNGYYG GVQFDQGTWVANGGLRYAPRADLATREEQIAVAEVTRARQGWDAWPVCSGRVGAH
Specific function: Unknown
COG id: COG3583
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39600; Mature: 39600
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS51109 G5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLTRLHETSSPIFRLVVGVLLLVIAFAGGYAVAAYKTVTLTVDGTPMQVMTMKSRVID CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEHHHHHHHH IIQENGFAVGECDDLYPAADVSVHATDNIVLRRSRPLQISLDGKDIQQVWTTASTVDEAL HHHHCCCEEECCCCCCCCCCEEEEECCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHH VQLALTDTAPIVASRGSRVPLTGMALPVVSAKTVQINDGGAVRMVHLPASNVGGLLAAVG HHHHCCCCCCHHHCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHC IPLLASDQVSPSATSPIVEGMQIQVTRNRIERVIERIPLPPSSRSIEDPEMNISRVVVED CCEEECCCCCCCCCCHHHCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC PGTPGTQDVTFAVATVNGVETGRLPVANVVVEPARESVIRVGTKPGTEVPPVSDGSIWDA CCCCCCCCEEEEEEEECCCCCCCCCEEHEEECCCHHCEEEECCCCCCCCCCCCCCCHHHH IAGCEAGGNWAINTGNGYYGGVQFDQGTWVANGGLRYAPRADLATREEQIAVAEVTRARQ HHCCCCCCCEEEECCCCEECCEEECCCCEEECCCEEECCCCCCCCCHHHHHHHHHHHHHC GWDAWPVCSGRVGAH CCCCCCCCCCCCCCC >Mature Secondary Structure MNVLTRLHETSSPIFRLVVGVLLLVIAFAGGYAVAAYKTVTLTVDGTPMQVMTMKSRVID CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEHHHHHHHH IIQENGFAVGECDDLYPAADVSVHATDNIVLRRSRPLQISLDGKDIQQVWTTASTVDEAL HHHHCCCEEECCCCCCCCCCEEEEECCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHH VQLALTDTAPIVASRGSRVPLTGMALPVVSAKTVQINDGGAVRMVHLPASNVGGLLAAVG HHHHCCCCCCHHHCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHC IPLLASDQVSPSATSPIVEGMQIQVTRNRIERVIERIPLPPSSRSIEDPEMNISRVVVED CCEEECCCCCCCCCCHHHCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC PGTPGTQDVTFAVATVNGVETGRLPVANVVVEPARESVIRVGTKPGTEVPPVSDGSIWDA CCCCCCCCEEEEEEEECCCCCCCCCEEHEEECCCHHCEEEECCCCCCCCCCCCCCCHHHH IAGCEAGGNWAINTGNGYYGGVQFDQGTWVANGGLRYAPRADLATREEQIAVAEVTRARQ HHCCCCCCCEEEECCCCEECCEEECCCCEEECCCEEECCCCCCCCCHHHHHHHHHHHHHC GWDAWPVCSGRVGAH CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA