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The map label for this gene is panD

Identifier: 221229506

GI number: 221229506

Start: 302419

End: 302847

Strand: Direct

Name: panD

Synonym: MLBr_00231

Alternate gene names: 221229506

Gene position: 302419-302847 (Clockwise)

Preceding gene: 221229505

Following gene: 221229507

Centisome position: 9.25

GC content: 56.18

Gene sequence:

>429_bases
ATGTTACGGACGATGCTAAAGTCTAAGATTCATCGCGCCACCGTCACGCAGGCTTATCTGCACTATGTCGGTTCGGTGAC
CATCGATGCCGATTTGATGGGCGCTGCGGACCTGCTTGAGGGTGAACAGGTTACCATTGTTGACATCAATAACGGTGCCC
GGCTCGTCACCTACGCAATTGCTGGCGAGCGTGGCACCGGTGTGATTGGAATCAATGGCGCCGCAGCGCATCTTGTTCAT
CCGGGCGATCTGGTAATCCTGATCTCCTATGGGACCATGGAAGATGCCGAGGCGCACGCTTATCAGCCGCGGATTGTGTT
CGTCGACGCCGATAACAAACCGATCGATCTGGGCCACGATCCAGGCTCCGTGCCCTTGGACATATCTGTCGCGGCTGAAC
TATTTGATCCCCGGATCGGTGCGCGGTAA

Upstream 100 bases:

>100_bases
GACTACTCGACAATATTTCGATTGAGATCGGAAATTTCTCCGGCATCGCTAGTCCGGACGAATGTCGGGTTGAACACGCC
CAAACACCTTGGATGAAGTG

Downstream 100 bases:

>100_bases
CTGTGCTGCTGGCCATCGACGTTCGCAACACGCATACCGTCGTCGGATTGCTGTCCGGATCCAAGGAGCATGCAAAGGTC
GTGCAGCAATGGCGGATCCG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MLRTMLKSKIHRATVTQAYLHYVGSVTIDADLMGAADLLEGEQVTIVDINNGARLVTYAIAGERGTGVIGINGAAAHLVH
PGDLVILISYGTMEDAEAHAYQPRIVFVDADNKPIDLGHDPGSVPLDISVAAELFDPRIGAR

Sequences:

>Translated_142_residues
MLRTMLKSKIHRATVTQAYLHYVGSVTIDADLMGAADLLEGEQVTIVDINNGARLVTYAIAGERGTGVIGINGAAAHLVH
PGDLVILISYGTMEDAEAHAYQPRIVFVDADNKPIDLGHDPGSVPLDISVAAELFDPRIGAR
>Mature_142_residues
MLRTMLKSKIHRATVTQAYLHYVGSVTIDADLMGAADLLEGEQVTIVDINNGARLVTYAIAGERGTGVIGINGAAAHLVH
PGDLVILISYGTMEDAEAHAYQPRIVFVDADNKPIDLGHDPGSVPLDISVAAELFDPRIGAR

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=129, Percent_Identity=44.1860465116279, Blast_Score=123, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_MYCLB (B8ZU50)

Other databases:

- EMBL:   FM211192
- RefSeq:   YP_002502922.1
- ProteinModelPortal:   B8ZU50
- SMR:   B8ZU50
- EnsemblBacteria:   EBMYCT00000086480
- GeneID:   7327349
- GenomeReviews:   FM211192_GR
- GeneTree:   EBGT00050000017253
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 15086; Mature: 15086

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTMLKSKIHRATVTQAYLHYVGSVTIDADLMGAADLLEGEQVTIVDINNGARLVTYAI
CCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEEEECCCCEEEEEEE
AGERGTGVIGINGAAAHLVHPGDLVILISYGTMEDAEAHAYQPRIVFVDADNKPIDLGHD
ECCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEECCCC
PGSVPLDISVAAELFDPRIGAR
CCCCCEEHEEEEECCCCCCCCC
>Mature Secondary Structure
MLRTMLKSKIHRATVTQAYLHYVGSVTIDADLMGAADLLEGEQVTIVDINNGARLVTYAI
CCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEEEECCCCEEEEEEE
AGERGTGVIGINGAAAHLVHPGDLVILISYGTMEDAEAHAYQPRIVFVDADNKPIDLGHD
ECCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEECCCC
PGSVPLDISVAAELFDPRIGAR
CCCCCEEHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA