| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229438
Identifier: 221229438
GI number: 221229438
Start: 173197
End: 174453
Strand: Reverse
Name: 221229438
Synonym: MLBr_00129
Alternate gene names: NA
Gene position: 174453-173197 (Counterclockwise)
Preceding gene: 221229439
Following gene: 221229433
Centisome position: 5.34
GC content: 59.67
Gene sequence:
>1257_bases ATGAGCCCAGATAAGCGTGAGTTCGACATTGTTTTGTACGGCGCTACAGGCTTCTCTGGCAAGTTGACCGCCGAACATCT CGCACTTAGCGAGTCCACAGCACGGATCGCGCTGGCCGGCCGGTCAAGCGAACGGTTACGGAACGTGCGGGCGCTGTTAG GCCCAAACGCACAGGACTGGCCGCTGATTGTCGCCGACGCGTCACAACCGTCGACGCTCGAGGCGATGGCGGGTCGAGCC CAGGTGGTGCTAACGACTGTTGGGCCGTATACGCGCTACGGACTGCCGCTGGTGGCGGCCTGCGCGAGAACTGGAACGGA CTATGCCGACTTGACCGGCGAACTGATGTTTTGCCGAAACAGTATTGATTTGCACCACAAACAAGCAGCCGCCACTGGCG CCCGGATAATCTTGGCGTGCGGATTCGATTCGGTCCCTTCAGATCTAAACGTTTACCAGCTGTACCGCCGGGTGATCGAA GACCGCACCGGTGAACTCTGCGACACCGACCTTGTGCTTCGCTCGTTCTCTCAGCGCTGGGTTTCCGGTGGCTCAGTTGC GGCATATTCGGAGGCAATGCTGACTACATCCAACGATCCCGAGGCCCTTCGGCTCGTCACCGACCCATATACTCTGACCA CAGACCGAGACGCCGAACCTGACCTGGGTCCGCAGCCAGACTTTCCCCGGCATCGAGGAAGTGATCTGGCCCCCGAACTT GCCGGATTCTGGACCGGGGGATTTGTTCAAGCCCAATTCAATACTCGAATTGTTCGGCGTAGCAATGCATTACAGAATTG GTCCTATGGCCGGCAATTCCGATACTCAGAGACGATGAGTCTGGGCAAGTCGTGGGCGGCACCAGTTGCTTCTGCAGCTG TCACCAGTGTTGTGGCTGGTGCTGTCGGCTTGGGAAACAAGTATTTCAACCGATTACCCCGGCGGGTAGTGGAACGCGTC ACACCCAAATCAGGCACTGGTCCAAGCCGAAAAACTCAAGCGCGGGGCCATTACACGTTCGAGACATACACCACGACAAC CACCGGTGCACGCTATATGGCGACTTTCGCGCACAACGTTGACGCGTACAAGTCGACAGCGGGGCTGCTTGCCGCAAGTG GTCTGACACTGGCGCTCGATCGCGATCGGCTCTCCGAGCTGCGGGGTGTGCTTACTCCCGCCGCGGCGATGGGCGAGGCG CTGCTGACGCGGCTCCCCAGCGCAGGCGTGGTCATAGGGACAACCCGGCTGAGCTGA
Upstream 100 bases:
>100_bases GTCCCGTTACCTGGAGGGCGGGGAGCTGTCATATCGGATGTACTCCTTCGCCAAGGACTGAGGCTGCGTCGATTGCAAGC ACTCGGGTAGTGTCACCCGG
Downstream 100 bases:
>100_bases CACTCAATCCGGTCACCGCCAAGGCGCACCGGCTGTGGCAAAAGACGAACCTAGAAGCTAGTCGTGGTCAAGCAAAGTGG ACCCGGAATCACGACTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSPDKREFDIVLYGATGFSGKLTAEHLALSESTARIALAGRSSERLRNVRALLGPNAQDWPLIVADASQPSTLEAMAGRA QVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRNSIDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIE DRTGELCDTDLVLRSFSQRWVSGGSVAAYSEAMLTTSNDPEALRLVTDPYTLTTDRDAEPDLGPQPDFPRHRGSDLAPEL AGFWTGGFVQAQFNTRIVRRSNALQNWSYGRQFRYSETMSLGKSWAAPVASAAVTSVVAGAVGLGNKYFNRLPRRVVERV TPKSGTGPSRKTQARGHYTFETYTTTTTGARYMATFAHNVDAYKSTAGLLAASGLTLALDRDRLSELRGVLTPAAAMGEA LLTRLPSAGVVIGTTRLS
Sequences:
>Translated_418_residues MSPDKREFDIVLYGATGFSGKLTAEHLALSESTARIALAGRSSERLRNVRALLGPNAQDWPLIVADASQPSTLEAMAGRA QVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRNSIDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIE DRTGELCDTDLVLRSFSQRWVSGGSVAAYSEAMLTTSNDPEALRLVTDPYTLTTDRDAEPDLGPQPDFPRHRGSDLAPEL AGFWTGGFVQAQFNTRIVRRSNALQNWSYGRQFRYSETMSLGKSWAAPVASAAVTSVVAGAVGLGNKYFNRLPRRVVERV TPKSGTGPSRKTQARGHYTFETYTTTTTGARYMATFAHNVDAYKSTAGLLAASGLTLALDRDRLSELRGVLTPAAAMGEA LLTRLPSAGVVIGTTRLS >Mature_417_residues SPDKREFDIVLYGATGFSGKLTAEHLALSESTARIALAGRSSERLRNVRALLGPNAQDWPLIVADASQPSTLEAMAGRAQ VVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRNSIDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIED RTGELCDTDLVLRSFSQRWVSGGSVAAYSEAMLTTSNDPEALRLVTDPYTLTTDRDAEPDLGPQPDFPRHRGSDLAPELA GFWTGGFVQAQFNTRIVRRSNALQNWSYGRQFRYSETMSLGKSWAAPVASAAVTSVVAGAVGLGNKYFNRLPRRVVERVT PKSGTGPSRKTQARGHYTFETYTTTTTGARYMATFAHNVDAYKSTAGLLAASGLTLALDRDRLSELRGVLTPAAAMGEAL LTRLPSAGVVIGTTRLS
Specific function: Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily
Homologues:
Organism=Homo sapiens, GI55770836, Length=169, Percent_Identity=37.2781065088757, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560066, Length=150, Percent_Identity=37.3333333333333, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI32567112, Length=150, Percent_Identity=37.3333333333333, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71991033, Length=416, Percent_Identity=25, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646278, Length=150, Percent_Identity=32, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24644140, Length=156, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644142, Length=156, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI21356081, Length=156, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAER_MYCLE (Q9CD87)
Other databases:
- EMBL: AL583917 - PIR: A86925 - RefSeq: NP_301223.1 - ProteinModelPortal: Q9CD87 - EnsemblBacteria: EBMYCT00000028234 - GeneID: 908431 - GenomeReviews: AL450380_GR - KEGG: mle:ML0129 - NMPDR: fig|272631.1.peg.95 - Leproma: ML0129 - GeneTree: EBGT00050000017653 - HOGENOM: HBG527018 - OMA: EEMATRA - ProtClustDB: CLSK2748649 - BioCyc: MLEP272631:ML0129-MONOMER - GO: GO:0005488 - InterPro: IPR016040 - InterPro: IPR005097 - Gene3D: G3DSA:3.40.50.720
Pfam domain/function: PF03435 Saccharop_dh
EC number: NA
Molecular weight: Translated: 45140; Mature: 45009
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDKREFDIVLYGATGFSGKLTAEHLALSESTARIALAGRSSERLRNVRALLGPNAQDW CCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PLIVADASQPSTLEAMAGRAQVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRN CEEEECCCCCCHHHHHCCCEEEEEEECCCHHHHCCHHHHHHHHCCCCHHHHCCEEEEEEC SIDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIEDRTGELCDTDLVLRSFSQRW CCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VSGGSVAAYSEAMLTTSNDPEALRLVTDPYTLTTDRDAEPDLGPQPDFPRHRGSDLAPEL CCCCCEEEHHHEEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH AGFWTGGFVQAQFNTRIVRRSNALQNWSYGRQFRYSETMSLGKSWAAPVASAAVTSVVAG HHHCCCCEEEEECCCEEHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH AVGLGNKYFNRLPRRVVERVTPKSGTGPSRKTQARGHYTFETYTTTTTGARYMATFAHNV HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCC DAYKSTAGLLAASGLTLALDRDRLSELRGVLTPAAAMGEALLTRLPSAGVVIGTTRLS HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure SPDKREFDIVLYGATGFSGKLTAEHLALSESTARIALAGRSSERLRNVRALLGPNAQDW CCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PLIVADASQPSTLEAMAGRAQVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRN CEEEECCCCCCHHHHHCCCEEEEEEECCCHHHHCCHHHHHHHHCCCCHHHHCCEEEEEEC SIDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIEDRTGELCDTDLVLRSFSQRW CCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VSGGSVAAYSEAMLTTSNDPEALRLVTDPYTLTTDRDAEPDLGPQPDFPRHRGSDLAPEL CCCCCEEEHHHEEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH AGFWTGGFVQAQFNTRIVRRSNALQNWSYGRQFRYSETMSLGKSWAAPVASAAVTSVVAG HHHCCCCEEEEECCCEEHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH AVGLGNKYFNRLPRRVVERVTPKSGTGPSRKTQARGHYTFETYTTTTTGARYMATFAHNV HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCC DAYKSTAGLLAASGLTLALDRDRLSELRGVLTPAAAMGEALLTRLPSAGVVIGTTRLS HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002