| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229354
Identifier: 221229354
GI number: 221229354
Start: 16562
End: 16975
Strand: Reverse
Name: 221229354
Synonym: MLBr_00012
Alternate gene names: NA
Gene position: 16975-16562 (Counterclockwise)
Preceding gene: 221229355
Following gene: 221229351
Centisome position: 0.52
GC content: 56.52
Gene sequence:
>414_bases ATGCAGCAAACAGCATGGGGACCGCGCACAGCGAGAATCGCTGGTTGTGGTGGTGCCGGCATTGTGATAGCTATTGCATG TTCGACGTTAGACATAGATACGCCAGGGTTCATGCTGACCGGGATTGCTGCACTGGGTCTGATCTTGTTTGCGGGATTGT CGTGGCGTGCACGCCCAAAGTTGGCAATTAACCCCGACGGTCTAGCAGTCCAGGGCTGGTTTCGAACACGGTTATTCGGA CCCGCTGACATCAAGATCATTCGGATCACTGAATTCCGCCGGTTTGGCCGCAAAGTCCGATTACTCGAGATCGAAGCCAT CAACGGAGACTTAGTGATCTTGTCCCGTTGGGACCTCGGAACCGGGCCACTGGAGGTGCTCGACGCGCTCATCACCGCCG GCTACGCTGGCTGA
Upstream 100 bases:
>100_bases ACAACTTTGCGATTACTCAATCACACTCGTGTGATTTATCCCCACTGTTGATAAAGTTTGTGGATAACTGCATCGGCAGT GGTGAGGGGCTGAATACCGT
Downstream 100 bases:
>100_bases AAAACGTTAAGCGACACGCAGCACCTAAGAAATTGTGATCGAGTCAATCACAACCGGTTCGGTAGGCCGGTCGTTGCCAT CGGTAGCTGTCGTCGAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MQQTAWGPRTARIAGCGGAGIVIAIACSTLDIDTPGFMLTGIAALGLILFAGLSWRARPKLAINPDGLAVQGWFRTRLFG PADIKIIRITEFRRFGRKVRLLEIEAINGDLVILSRWDLGTGPLEVLDALITAGYAG
Sequences:
>Translated_137_residues MQQTAWGPRTARIAGCGGAGIVIAIACSTLDIDTPGFMLTGIAALGLILFAGLSWRARPKLAINPDGLAVQGWFRTRLFG PADIKIIRITEFRRFGRKVRLLEIEAINGDLVILSRWDLGTGPLEVLDALITAGYAG >Mature_137_residues MQQTAWGPRTARIAGCGGAGIVIAIACSTLDIDTPGFMLTGIAALGLILFAGLSWRARPKLAINPDGLAVQGWFRTRLFG PADIKIIRITEFRRFGRKVRLLEIEAINGDLVILSRWDLGTGPLEVLDALITAGYAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019692 [H]
Pfam domain/function: PF10756 DUF2581 [H]
EC number: NA
Molecular weight: Translated: 14691; Mature: 14691
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTAWGPRTARIAGCGGAGIVIAIACSTLDIDTPGFMLTGIAALGLILFAGLSWRARPK CCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC LAINPDGLAVQGWFRTRLFGPADIKIIRITEFRRFGRKVRLLEIEAINGDLVILSRWDLG EEECCCCEEEEEEEEHEECCCCCEEEEEEHHHHHCCCEEEEEEEEECCCCEEEEEECCCC TGPLEVLDALITAGYAG CCHHHHHHHHHHCCCCC >Mature Secondary Structure MQQTAWGPRTARIAGCGGAGIVIAIACSTLDIDTPGFMLTGIAALGLILFAGLSWRARPK CCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC LAINPDGLAVQGWFRTRLFGPADIKIIRITEFRRFGRKVRLLEIEAINGDLVILSRWDLG EEECCCCEEEEEEEEHEECCCCCEEEEEEHHHHHCCCEEEEEEEEECCCCEEEEEECCCC TGPLEVLDALITAGYAG CCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]