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The map label for this gene is ydfK [H]

Identifier: 220933182

GI number: 220933182

Start: 2567875

End: 2568558

Strand: Reverse

Name: ydfK [H]

Synonym: Hore_23500

Alternate gene names: 220933182

Gene position: 2568558-2567875 (Counterclockwise)

Preceding gene: 220933183

Following gene: 220933181

Centisome position: 99.63

GC content: 35.96

Gene sequence:

>684_bases
ATGATGGGAACAGTAATAAATGTTGTTGCTATTATAACTGGCAGTGTAATTGGATTATTGATAAAGGGAAAATTACCCGA
CAAAATACAAAAAACAGTTATGGATGGGCTGGGGTTAGCCGTTATCTTAATTGGATTACAGATGGCCCTGGAAACAAAAA
ATATTTTAATAGTAATATTTAGTCTGGTGATCGGTGGTGTAACTGGGGGGGTTATTAATCTTGAAGAAGGGCTCAACAAA
TTAGCTGTTAGCCTTGAGAAAAAGTATGCAAAATCAGGTGATGGTTTATTTGTTCAGGGATTTATTCAGGCCAGCCTTGT
TTTTTGTGTGGGACCAATTGCAATTATGGGAGCCATTCAGGATGGTATAAATGGTGATCCAACTATATTAATTAATAAAG
CTATTCTTGATGGTATTTCCTCTATAGCTTTTTCAGCAACCTTTGGATTAGGGGTTATTTTTTCAGCTGTTGCTGTTTTA
ATTTATCAGGGAGGAATAACTTTACTGGCTACCTGGGCTCAGGGTTTTCTCGTCAGTACAATTATAACAGAGATGACCGC
AACCGGGGGACTGATTATTTTAGCTATTGGTTTAAATATACTAAAAATTACCGATATTAAAGTAGGAAATTTATTACCTT
CCATTCTGGTAGCGATTTTGTTGGCCCGGATATTTTTAGTTTAA

Upstream 100 bases:

>100_bases
TTACAAATAAATGTGTTTAAATTATTTAGAAAGGTATTATAAAAATTAGAAGAGTTAATAAAAATAAGAGATAAAAAAAT
TAAAAACAGGTGAGGTAAAA

Downstream 100 bases:

>100_bases
TTGGAATACTAAAGGTCTGATGGGTCGATTTATTATTTATTTCCCCGGGGTGAATATTATTTTTATATAAAATATTATGT
TTATATAATTAAATAAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MMGTVINVVAIITGSVIGLLIKGKLPDKIQKTVMDGLGLAVILIGLQMALETKNILIVIFSLVIGGVTGGVINLEEGLNK
LAVSLEKKYAKSGDGLFVQGFIQASLVFCVGPIAIMGAIQDGINGDPTILINKAILDGISSIAFSATFGLGVIFSAVAVL
IYQGGITLLATWAQGFLVSTIITEMTATGGLIILAIGLNILKITDIKVGNLLPSILVAILLARIFLV

Sequences:

>Translated_227_residues
MMGTVINVVAIITGSVIGLLIKGKLPDKIQKTVMDGLGLAVILIGLQMALETKNILIVIFSLVIGGVTGGVINLEEGLNK
LAVSLEKKYAKSGDGLFVQGFIQASLVFCVGPIAIMGAIQDGINGDPTILINKAILDGISSIAFSATFGLGVIFSAVAVL
IYQGGITLLATWAQGFLVSTIITEMTATGGLIILAIGLNILKITDIKVGNLLPSILVAILLARIFLV
>Mature_227_residues
MMGTVINVVAIITGSVIGLLIKGKLPDKIQKTVMDGLGLAVILIGLQMALETKNILIVIFSLVIGGVTGGVINLEEGLNK
LAVSLEKKYAKSGDGLFVQGFIQASLVFCVGPIAIMGAIQDGINGDPTILINKAILDGISSIAFSATFGLGVIFSAVAVL
IYQGGITLLATWAQGFLVSTIITEMTATGGLIILAIGLNILKITDIKVGNLLPSILVAILLARIFLV

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=168, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 23471; Mature: 23471

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGTVINVVAIITGSVIGLLIKGKLPDKIQKTVMDGLGLAVILIGLQMALETKNILIVIF
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
SLVIGGVTGGVINLEEGLNKLAVSLEKKYAKSGDGLFVQGFIQASLVFCVGPIAIMGAIQ
HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
DGINGDPTILINKAILDGISSIAFSATFGLGVIFSAVAVLIYQGGITLLATWAQGFLVST
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IITEMTATGGLIILAIGLNILKITDIKVGNLLPSILVAILLARIFLV
HHHHHHCCCCEEEEEECCCEEEEECEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMGTVINVVAIITGSVIGLLIKGKLPDKIQKTVMDGLGLAVILIGLQMALETKNILIVIF
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHH
SLVIGGVTGGVINLEEGLNKLAVSLEKKYAKSGDGLFVQGFIQASLVFCVGPIAIMGAIQ
HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
DGINGDPTILINKAILDGISSIAFSATFGLGVIFSAVAVLIYQGGITLLATWAQGFLVST
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IITEMTATGGLIILAIGLNILKITDIKVGNLLPSILVAILLARIFLV
HHHHHHCCCCEEEEEECCCEEEEECEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]