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The map label for this gene is ssb [H]

Identifier: 220933167

GI number: 220933167

Start: 2554662

End: 2555063

Strand: Reverse

Name: ssb [H]

Synonym: Hore_23350

Alternate gene names: 220933167

Gene position: 2555063-2554662 (Counterclockwise)

Preceding gene: 220933168

Following gene: 220933166

Centisome position: 99.1

GC content: 41.54

Gene sequence:

>402_bases
TTGCTTAACCGAGTAGTATTGATTGGTCGTTTGGTTAGAGATCCTGAACTCAGGTATACCAGTAATGGAACACCGGTAAG
CAACTTTACACTGGCAGTTGAACGTAATTACACAAACCAGCAGGGAGAGCGAGATGTAGATTTTATCAAGATTGTTACCT
GGAGGAAGCTTGCCGAGACATGTGCCCATCACCTGGGTAAAGGTAGATTAGTAGCAGTAGATGGTTCCCTGCAGATAAGA
AAAAGCGAAAGAGATGGTAGGACCTATTATAATCCAGAAGTGGTTGCTGATAATGTCCGTTTCCTGGATTGGCCAAGTGA
TAACAACAGGAATAAATCCAGAGATGACATAAATGAAGAGGAAGTCTTTGATATAGATGATGAGTTCGATGTACCGTTTT
AA

Upstream 100 bases:

>100_bases
ACCATTGATGAAATGGAAAGATATTTTAATCTGACAGATAGTGTTTTACGGTATTTAGTTATCAGGGAGGACAAGTAAAC
CTACCGGGGTGGTGACTTTA

Downstream 100 bases:

>100_bases
AAAGGAGGGAAAAAGCATTGGCTAGAAGAAATAAGCCCTGTTATTTCTGTACCAATAAAAAGGCAAAGCTTGATTATAAA
GAAGTTAAAACCCTGGAACG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLNRVVLIGRLVRDPELRYTSNGTPVSNFTLAVERNYTNQQGERDVDFIKIVTWRKLAETCAHHLGKGRLVAVDGSLQIR
KSERDGRTYYNPEVVADNVRFLDWPSDNNRNKSRDDINEEEVFDIDDEFDVPF

Sequences:

>Translated_133_residues
MLNRVVLIGRLVRDPELRYTSNGTPVSNFTLAVERNYTNQQGERDVDFIKIVTWRKLAETCAHHLGKGRLVAVDGSLQIR
KSERDGRTYYNPEVVADNVRFLDWPSDNNRNKSRDDINEEEVFDIDDEFDVPF
>Mature_133_residues
MLNRVVLIGRLVRDPELRYTSNGTPVSNFTLAVERNYTNQQGERDVDFIKIVTWRKLAETCAHHLGKGRLVAVDGSLQIR
KSERDGRTYYNPEVVADNVRFLDWPSDNNRNKSRDDINEEEVFDIDDEFDVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=37, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15473; Mature: 15473

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRVVLIGRLVRDPELRYTSNGTPVSNFTLAVERNYTNQQGERDVDFIKIVTWRKLAET
CCCCEEEEEEHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHH
CAHHLGKGRLVAVDGSLQIRKSERDGRTYYNPEVVADNVRFLDWPSDNNRNKSRDDINEE
HHHHCCCCCEEEECCCEEEEECCCCCCEEECCEEEECCEEEEECCCCCCCCCCCCCCCCC
EVFDIDDEFDVPF
CEEECCCCCCCCC
>Mature Secondary Structure
MLNRVVLIGRLVRDPELRYTSNGTPVSNFTLAVERNYTNQQGERDVDFIKIVTWRKLAET
CCCCEEEEEEHHCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHH
CAHHLGKGRLVAVDGSLQIRKSERDGRTYYNPEVVADNVRFLDWPSDNNRNKSRDDINEE
HHHHCCCCCEEEECCCEEEEECCCCCCEEECCEEEECCEEEEECCCCCCCCCCCCCCCCC
EVFDIDDEFDVPF
CEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]