| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220933108
Identifier: 220933108
GI number: 220933108
Start: 2484788
End: 2485138
Strand: Reverse
Name: 220933108
Synonym: Hore_22760
Alternate gene names: NA
Gene position: 2485138-2484788 (Counterclockwise)
Preceding gene: 220933109
Following gene: 220933107
Centisome position: 96.39
GC content: 47.01
Gene sequence:
>351_bases ATGAAAAATTATTTTAAATCAATCAAAAGCCCCTTACAGATGGCCGGTTTTTATCTGGCCTGGATTGAAACTGCCCTGGC GGCAGGCTTATGGCCCCTTAAAGGTCATGAAGAGCTTCTGCCAGTTTTGCTCTACACCGTGGTCGGGGTGGCTATTGCCT TTGCCGGGGCCATGATTTTTATCCTGGTATATCTGGTTATTAAAGACCCCCACTGGCTTTTTAATCCATCTGACTATGAC CCCAGTGTCCAGGATGAACTCTTCGACGGGGAACACGATATAGGCAAGGTTGGACAGATATCCAACCCTTATCCAGGGAA TAAAGGAGAGAAAAAGGGGGTCAGGGGTTAA
Upstream 100 bases:
>100_bases TTATCCGGTCAGGTTTTTTTATTACATCAGGCAGGAAATTGTAAATATTTCTACAAATGTAATTATAATAAAATATTTTG TAGAAACGGAGGTAAGTAAA
Downstream 100 bases:
>100_bases TCTTTTAAAGGGTAAAACACAAAAGCCATATAAAAGTACATATAAGTTTTTTGTCCATGGTCCGGCCATGGATTTTTTTA TTATAACTTTATTAAACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKNYFKSIKSPLQMAGFYLAWIETALAAGLWPLKGHEELLPVLLYTVVGVAIAFAGAMIFILVYLVIKDPHWLFNPSDYD PSVQDELFDGEHDIGKVGQISNPYPGNKGEKKGVRG
Sequences:
>Translated_116_residues MKNYFKSIKSPLQMAGFYLAWIETALAAGLWPLKGHEELLPVLLYTVVGVAIAFAGAMIFILVYLVIKDPHWLFNPSDYD PSVQDELFDGEHDIGKVGQISNPYPGNKGEKKGVRG >Mature_116_residues MKNYFKSIKSPLQMAGFYLAWIETALAAGLWPLKGHEELLPVLLYTVVGVAIAFAGAMIFILVYLVIKDPHWLFNPSDYD PSVQDELFDGEHDIGKVGQISNPYPGNKGEKKGVRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12867; Mature: 12867
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYFKSIKSPLQMAGFYLAWIETALAAGLWPLKGHEELLPVLLYTVVGVAIAFAGAMIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILVYLVIKDPHWLFNPSDYDPSVQDELFDGEHDIGKVGQISNPYPGNKGEKKGVRG HHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNYFKSIKSPLQMAGFYLAWIETALAAGLWPLKGHEELLPVLLYTVVGVAIAFAGAMIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILVYLVIKDPHWLFNPSDYDPSVQDELFDGEHDIGKVGQISNPYPGNKGEKKGVRG HHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA