| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932875
Identifier: 220932875
GI number: 220932875
Start: 2203865
End: 2205316
Strand: Reverse
Name: 220932875
Synonym: Hore_20430
Alternate gene names: NA
Gene position: 2205316-2203865 (Counterclockwise)
Preceding gene: 220932876
Following gene: 220932874
Centisome position: 85.54
GC content: 38.36
Gene sequence:
>1452_bases ATGATAATTAATTCCATTATTAACAACAGGAGTCATAGAATTATAATATTATTAATTGTAATTTTGTATTTAATTGGATT TAAAGCTGTTACTGTTGAAGGAGCTGGCCTCAGGGTATCCCCGTTATATATTCAAAAAGAGGTTAAGGACGGGGAGATAC TGGGTCCTGTAGTTATAACTAATAATTCCCCGATGGATTTCAAGGTCAGGATTTTTGCAGTCACGGCTGAACATGATCTG GAGGGTACTGTTGTTATAAAGGAAGAAAATAAGACCGATATGCTGATCCTGGAAAATACCGATTTTACCCTGAAAAAGGG TGGCCAAAAAGAAATTTATCCCCGGGTTAATTTAAAGGGGATAGAAACAGGTGGTATTTATCCTGTACTGGTAATTGATG CCCTTCCCGTTTCAGAGAATGGGACCAATGTCAGTGCCAGCTTCAGGTTTTCTGTCCTGACATTACTCACGGTTAAGGAT CCCGGAGAAAGCAGGGGACAGATCAGTGAAGTTAAGGTTGAACAGCCTGACAAAGGGGAACCCTTGACCTTTAAGGTTCT TGTTGAAAATAATAGTAAAATTCATCGTAAACCGGTTGGTAGTGTTCTGGTTTATAGTGAGGGAGATGTTATTGACAAAA TCCCCTTGAAACCTGAGAATATATTGCCCGGGAATATGCGCTGGATTAAAGGATTATGGAAACCATCTGATCTACCTCCC GGTTCTTACACATATAAAGGGGAATTGTATCTGGGAAATTATAAACTTAATATTCCTTCTGGTAAATTTGGGATTCATGA GCCCTATACCTTAACCAGGCGTAATCTTGAATTAACCAGGGTAGGGATTCCTTTAGCCTCTGTCAAGGAAGGGATAAACT ATAGATTGCTTGTCAGCAATGAAGGTAATATTGAGGATACATTTAAAGGGGAAATCAGGATAGTTAGTAAGAAAAACGGT AACACTTTAATTAATAAAAGGGTTTCTGTTCCGGAAATAAAACCGGGTAGTAGTAGTTTAGTAGAAGATAGTCTTGATGC CTCTGACCTAAAGACAGGCCAGTATGTTTTTCAGGTAGTTAATAATTTCAATAAAATTATGGAGAGCAGGGAATTTGAAT TACTCCTTGAAAAACCTGTAGTAAAACTGGCTATAAGCAAATTTTCAATTCCTAATTTTAAGGAAGGAAAACCTGTCAAG GCCACAGTTGTATTTACCAATGAGGGTAATACATTACTCGAATTACAGGGTATGCTGGAGTTTAAAGATCTTGATGGTAA CCGGGTTGGTTTCTTACCCCTTAAGGGATTAAAAGTTGAACCTGGCCAGAGCCTTGAAAAGGTATATACATGGCAGGGGG GTATACCGGCCGGATTGTATGAAGGAATTATTACCGTTATTTACGGTGATAAATCGTTACGCAAAAATACCAGTTTTATG ATTCAACCGTAG
Upstream 100 bases:
>100_bases CTAATAAACTGATATAACCAAGATTTATAGCAGGATATGATGACAAGGGTGGGCGTAAAGTACCACCCTTACCTTGTCTT TAAGGAGGATGAAGCTTTTC
Downstream 100 bases:
>100_bases GAAGTTAATTAGGGGGGATTTTAGTGGGGGGTAAAAAACCTGGATGGGATAAATTTTTCCTCATACTTATTTTCCTGTTA TTTATAACCTGGGCCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MIINSIINNRSHRIIILLIVILYLIGFKAVTVEGAGLRVSPLYIQKEVKDGEILGPVVITNNSPMDFKVRIFAVTAEHDL EGTVVIKEENKTDMLILENTDFTLKKGGQKEIYPRVNLKGIETGGIYPVLVIDALPVSENGTNVSASFRFSVLTLLTVKD PGESRGQISEVKVEQPDKGEPLTFKVLVENNSKIHRKPVGSVLVYSEGDVIDKIPLKPENILPGNMRWIKGLWKPSDLPP GSYTYKGELYLGNYKLNIPSGKFGIHEPYTLTRRNLELTRVGIPLASVKEGINYRLLVSNEGNIEDTFKGEIRIVSKKNG NTLINKRVSVPEIKPGSSSLVEDSLDASDLKTGQYVFQVVNNFNKIMESREFELLLEKPVVKLAISKFSIPNFKEGKPVK ATVVFTNEGNTLLELQGMLEFKDLDGNRVGFLPLKGLKVEPGQSLEKVYTWQGGIPAGLYEGIITVIYGDKSLRKNTSFM IQP
Sequences:
>Translated_483_residues MIINSIINNRSHRIIILLIVILYLIGFKAVTVEGAGLRVSPLYIQKEVKDGEILGPVVITNNSPMDFKVRIFAVTAEHDL EGTVVIKEENKTDMLILENTDFTLKKGGQKEIYPRVNLKGIETGGIYPVLVIDALPVSENGTNVSASFRFSVLTLLTVKD PGESRGQISEVKVEQPDKGEPLTFKVLVENNSKIHRKPVGSVLVYSEGDVIDKIPLKPENILPGNMRWIKGLWKPSDLPP GSYTYKGELYLGNYKLNIPSGKFGIHEPYTLTRRNLELTRVGIPLASVKEGINYRLLVSNEGNIEDTFKGEIRIVSKKNG NTLINKRVSVPEIKPGSSSLVEDSLDASDLKTGQYVFQVVNNFNKIMESREFELLLEKPVVKLAISKFSIPNFKEGKPVK ATVVFTNEGNTLLELQGMLEFKDLDGNRVGFLPLKGLKVEPGQSLEKVYTWQGGIPAGLYEGIITVIYGDKSLRKNTSFM IQP >Mature_483_residues MIINSIINNRSHRIIILLIVILYLIGFKAVTVEGAGLRVSPLYIQKEVKDGEILGPVVITNNSPMDFKVRIFAVTAEHDL EGTVVIKEENKTDMLILENTDFTLKKGGQKEIYPRVNLKGIETGGIYPVLVIDALPVSENGTNVSASFRFSVLTLLTVKD PGESRGQISEVKVEQPDKGEPLTFKVLVENNSKIHRKPVGSVLVYSEGDVIDKIPLKPENILPGNMRWIKGLWKPSDLPP GSYTYKGELYLGNYKLNIPSGKFGIHEPYTLTRRNLELTRVGIPLASVKEGINYRLLVSNEGNIEDTFKGEIRIVSKKNG NTLINKRVSVPEIKPGSSSLVEDSLDASDLKTGQYVFQVVNNFNKIMESREFELLLEKPVVKLAISKFSIPNFKEGKPVK ATVVFTNEGNTLLELQGMLEFKDLDGNRVGFLPLKGLKVEPGQSLEKVYTWQGGIPAGLYEGIITVIYGDKSLRKNTSFM IQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53653; Mature: 53653
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINSIINNRSHRIIILLIVILYLIGFKAVTVEGAGLRVSPLYIQKEVKDGEILGPVVIT CEECCHHCCCCCEEHHHHHHHHHHHCCEEEEEECCCEEEEEEEEEEECCCCCEECCEEEE NNSPMDFKVRIFAVTAEHDLEGTVVIKEENKTDMLILENTDFTLKKGGQKEIYPRVNLKG CCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCEEEE IETGGIYPVLVIDALPVSENGTNVSASFRFSVLTLLTVKDPGESRGQISEVKVEQPDKGE EECCCEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCC PLTFKVLVENNSKIHRKPVGSVLVYSEGDVIDKIPLKPENILPGNMRWIKGLWKPSDLPP CEEEEEEEECCCEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCC GSYTYKGELYLGNYKLNIPSGKFGIHEPYTLTRRNLELTRVGIPLASVKEGINYRLLVSN CCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCHHHHHCCCCEEEEECC EGNIEDTFKGEIRIVSKKNGNTLINKRVSVPEIKPGSSSLVEDSLDASDLKTGQYVFQVV CCCCCEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHH NNFNKIMESREFELLLEKPVVKLAISKFSIPNFKEGKPVKATVVFTNEGNTLLELQGMLE HHHHHHHHCCCEEEEECCCEEEEEEHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEE FKDLDGNRVGFLPLKGLKVEPGQSLEKVYTWQGGIPAGLYEGIITVIYGDKSLRKNTSFM EEECCCCEEEEEEECCEEECCCCCHHHEEEECCCCCHHHHCCEEEEEECCHHHCCCCCEE IQP EEC >Mature Secondary Structure MIINSIINNRSHRIIILLIVILYLIGFKAVTVEGAGLRVSPLYIQKEVKDGEILGPVVIT CEECCHHCCCCCEEHHHHHHHHHHHCCEEEEEECCCEEEEEEEEEEECCCCCEECCEEEE NNSPMDFKVRIFAVTAEHDLEGTVVIKEENKTDMLILENTDFTLKKGGQKEIYPRVNLKG CCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCEEEE IETGGIYPVLVIDALPVSENGTNVSASFRFSVLTLLTVKDPGESRGQISEVKVEQPDKGE EECCCEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCC PLTFKVLVENNSKIHRKPVGSVLVYSEGDVIDKIPLKPENILPGNMRWIKGLWKPSDLPP CEEEEEEEECCCEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCC GSYTYKGELYLGNYKLNIPSGKFGIHEPYTLTRRNLELTRVGIPLASVKEGINYRLLVSN CCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEEEECCCHHHHHCCCCEEEEECC EGNIEDTFKGEIRIVSKKNGNTLINKRVSVPEIKPGSSSLVEDSLDASDLKTGQYVFQVV CCCCCEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHH NNFNKIMESREFELLLEKPVVKLAISKFSIPNFKEGKPVKATVVFTNEGNTLLELQGMLE HHHHHHHHCCCEEEEECCCEEEEEEHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEE FKDLDGNRVGFLPLKGLKVEPGQSLEKVYTWQGGIPAGLYEGIITVIYGDKSLRKNTSFM EEECCCCEEEEEEECCEEECCCCCHHHEEEECCCCCHHHHCCEEEEEECCHHHCCCCCEE IQP EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA