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The map label for this gene is mcpB [H]

Identifier: 220932823

GI number: 220932823

Start: 2143900

End: 2145984

Strand: Reverse

Name: mcpB [H]

Synonym: Hore_19890

Alternate gene names: 220932823

Gene position: 2145984-2143900 (Counterclockwise)

Preceding gene: 220932824

Following gene: 220932822

Centisome position: 83.24

GC content: 38.27

Gene sequence:

>2085_bases
ATGGCCTTTAATAAATTTATTAAAAAAATAAGCTTTTTTAATAAGATTGGCTTAAGTTTAAAGATTAGCTCTATACTGGC
CTTTGTTGTTGTTCTGGTAATGGGCTTTGTTTCTTTTTATACCTATAACTATACGGCCAATATGGTGTTAAGACAGGTTA
ATGGACAGATAGAGACCGTTAAAACCTCACAGAAAAAGACTATAAATAATTTTATGGAAAACCTGGGAAAACAGGTATCC
AGTTTTACTAAAGATGAAGACCTGTTTCATTTTGTGGACATGGTAAATTACAACCTGAAAAATGGCGACCTTGAAGGTTT
CATTAAAATATATGGATTTACGGTAGTTGACTCCAGTAGAATACTGGCTAATCAGCAGAAAATTATTAACGGGGCCAGCT
TTGTTTATATTACCAATAAGGATGGAATAATAATAGCAGATTCACGCCTCAAAAATAAAGAACAAATTAATGATTTTGTG
GGAAAAAAGCTTGATACAGTAGAATATAAAGGAGCCAGGGAAGACCAGGTTTTTATAGTTAATAACAAACCGGTTCTTCT
TTTTCAAAAAGAGATAAATAAGGAAGATGAAGTCATTGGACATTATGTTATGGGTATTTCTTTAATGAATATTTATAATC
GATTTCAGATGGAACTGGATTCCCGTTTTAGCATGCAGCTTGTAAATGGAGACGGAATTATTCTTAATAGCCCTGACAGT
GATTTAATTGGAAAAAAGGTCACGGATAAATGGATTATAAATAATATTAAAGAGAATGTTTCCTCTAATTATAGATATAC
AGAGGATTTATACCAGTCCCTGGAAAGGCTGGGTCGGAGTAGCAGGCTTTATCTGGTAATAGATGTGCCGAGAGTTATTT
TAACAGATCCTGCCCGTAAAATAGGATTTACAATTCTGGGTATTGCTCTGGTGGGTGTCATTATTATCCTGGGTGGTGGC
TATCTTCTGGTAAGGTGGCAATTAAAACCGCTGAAACGTTTACTGGCTTCGTTTAACCGTCTGAAGGAAGGTGAAATCAC
TGACAGTACCTATTTGAAAGGAAATGATGTTACCCGTGGTGATGAGCTGGGAATTTTGAATAGGTCTTTTAATGATATGG
TCAGGCGGCTTCAGGGAATAATTACCTCAATAAGCGGGGCCGCAAGCAGTGTTAATAGTTCTTCCAATCACCTGAAAGAA
AACTCCCGGGATGTTGGTATTATATCAGAAAAGGTGGCAAAATCAATCCAGGAAGTTGCTGCCGGGGCTGATAATCAGGC
CGAGAGTGTAGATGAAATAAACAAAAAAATGCAGAATTTAACTGGTGTTGTGGAAAACCTGGAAAATACAAACACTCAAT
TAAAAGAACTCTCCGGTACTATGGAGAAGGCTACGGCCCGGGGACAGCAGGAGATAGAAAAAGTAAGTGGACAGATGAAT
AAAATCAGGGATTCAATTGAGGAAGTAGCTACAGGGATAAGCAGTTTTACTTCAATTTCAGAGGAGATAGATGATATTGT
AGTTATCATTAATAGTATTGCTGAACAGACCAACCTTCTGGCCCTAAATGCAGCTATTGAGGCTGCCAGAGCCGGTGAAG
CCGGCCGGGGTTTTTCTGTTGTGGCTGATGAAATCAGAAACCTGGCTGTAGAATCGGTAAAATCAGCTGATCGCATCAGA
GATTTAATTGAACAGATAAAACAGGAATCAGAACGGGCAAGTATCAAAATGACCCAGGGAACCGAAGAAGTTCAACGGGG
GGAAAGTGTAGTAACATCGGCTAAGGAGGCATTTACGGAAATAAGGGAAATTATCGGTGATGTTATAAAAGGAATTGAAT
CATCTAATGAGGCTATTAAGGATGTTAATACTGACAGTAAGAAGATTGCTGCTAATGTAGAGACAATAGCCTCTATTTCC
GAACAGACATCAGCCAGTGCCCAGGAGGTTGCTTCTGCCAGTGAGGAACAGACAGCCTCCATTGAAGAGATTACTTCATT
ATCTGAAGAACTATCAAATATGGCCGATAAATTAAACGAACTGGTCAGGGAATTCAAACTAGAAGAGAAGGAGGGGATAG
TTTGA

Upstream 100 bases:

>100_bases
CCCTTTATTTTCATAACTCCATCTTTATAATCTTGTTACCGGTTTATAGTTTAAAAAACAGGCCACTTGAAACAGGCCAT
TTAATAAGAGGTGTGGTGAC

Downstream 100 bases:

>100_bases
AAGGGTTATTATCCAGAAAAATTAATAAACCTGTTATGTTGGCAGAAAAAAAAGACGGTATATACCCATATATTTTGCTG
GCCCCCAGTATTCTAATTTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MAFNKFIKKISFFNKIGLSLKISSILAFVVVLVMGFVSFYTYNYTANMVLRQVNGQIETVKTSQKKTINNFMENLGKQVS
SFTKDEDLFHFVDMVNYNLKNGDLEGFIKIYGFTVVDSSRILANQQKIINGASFVYITNKDGIIIADSRLKNKEQINDFV
GKKLDTVEYKGAREDQVFIVNNKPVLLFQKEINKEDEVIGHYVMGISLMNIYNRFQMELDSRFSMQLVNGDGIILNSPDS
DLIGKKVTDKWIINNIKENVSSNYRYTEDLYQSLERLGRSSRLYLVIDVPRVILTDPARKIGFTILGIALVGVIIILGGG
YLLVRWQLKPLKRLLASFNRLKEGEITDSTYLKGNDVTRGDELGILNRSFNDMVRRLQGIITSISGAASSVNSSSNHLKE
NSRDVGIISEKVAKSIQEVAAGADNQAESVDEINKKMQNLTGVVENLENTNTQLKELSGTMEKATARGQQEIEKVSGQMN
KIRDSIEEVATGISSFTSISEEIDDIVVIINSIAEQTNLLALNAAIEAARAGEAGRGFSVVADEIRNLAVESVKSADRIR
DLIEQIKQESERASIKMTQGTEEVQRGESVVTSAKEAFTEIREIIGDVIKGIESSNEAIKDVNTDSKKIAANVETIASIS
EQTSASAQEVASASEEQTASIEEITSLSEELSNMADKLNELVREFKLEEKEGIV

Sequences:

>Translated_694_residues
MAFNKFIKKISFFNKIGLSLKISSILAFVVVLVMGFVSFYTYNYTANMVLRQVNGQIETVKTSQKKTINNFMENLGKQVS
SFTKDEDLFHFVDMVNYNLKNGDLEGFIKIYGFTVVDSSRILANQQKIINGASFVYITNKDGIIIADSRLKNKEQINDFV
GKKLDTVEYKGAREDQVFIVNNKPVLLFQKEINKEDEVIGHYVMGISLMNIYNRFQMELDSRFSMQLVNGDGIILNSPDS
DLIGKKVTDKWIINNIKENVSSNYRYTEDLYQSLERLGRSSRLYLVIDVPRVILTDPARKIGFTILGIALVGVIIILGGG
YLLVRWQLKPLKRLLASFNRLKEGEITDSTYLKGNDVTRGDELGILNRSFNDMVRRLQGIITSISGAASSVNSSSNHLKE
NSRDVGIISEKVAKSIQEVAAGADNQAESVDEINKKMQNLTGVVENLENTNTQLKELSGTMEKATARGQQEIEKVSGQMN
KIRDSIEEVATGISSFTSISEEIDDIVVIINSIAEQTNLLALNAAIEAARAGEAGRGFSVVADEIRNLAVESVKSADRIR
DLIEQIKQESERASIKMTQGTEEVQRGESVVTSAKEAFTEIREIIGDVIKGIESSNEAIKDVNTDSKKIAANVETIASIS
EQTSASAQEVASASEEQTASIEEITSLSEELSNMADKLNELVREFKLEEKEGIV
>Mature_693_residues
AFNKFIKKISFFNKIGLSLKISSILAFVVVLVMGFVSFYTYNYTANMVLRQVNGQIETVKTSQKKTINNFMENLGKQVSS
FTKDEDLFHFVDMVNYNLKNGDLEGFIKIYGFTVVDSSRILANQQKIINGASFVYITNKDGIIIADSRLKNKEQINDFVG
KKLDTVEYKGAREDQVFIVNNKPVLLFQKEINKEDEVIGHYVMGISLMNIYNRFQMELDSRFSMQLVNGDGIILNSPDSD
LIGKKVTDKWIINNIKENVSSNYRYTEDLYQSLERLGRSSRLYLVIDVPRVILTDPARKIGFTILGIALVGVIIILGGGY
LLVRWQLKPLKRLLASFNRLKEGEITDSTYLKGNDVTRGDELGILNRSFNDMVRRLQGIITSISGAASSVNSSSNHLKEN
SRDVGIISEKVAKSIQEVAAGADNQAESVDEINKKMQNLTGVVENLENTNTQLKELSGTMEKATARGQQEIEKVSGQMNK
IRDSIEEVATGISSFTSISEEIDDIVVIINSIAEQTNLLALNAAIEAARAGEAGRGFSVVADEIRNLAVESVKSADRIRD
LIEQIKQESERASIKMTQGTEEVQRGESVVTSAKEAFTEIREIIGDVIKGIESSNEAIKDVNTDSKKIAANVETIASISE
QTSASAQEVASASEEQTASIEEITSLSEELSNMADKLNELVREFKLEEKEGIV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=309, Percent_Identity=28.4789644012945, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1788194, Length=393, Percent_Identity=27.735368956743, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=29.4478527607362, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787690, Length=365, Percent_Identity=27.1232876712329, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1789453, Length=403, Percent_Identity=27.2952853598015, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 77050; Mature: 76918

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNKFIKKISFFNKIGLSLKISSILAFVVVLVMGFVSFYTYNYTANMVLRQVNGQIETV
CCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEE
KTSQKKTINNFMENLGKQVSSFTKDEDLFHFVDMVNYNLKNGDLEGFIKIYGFTVVDSSR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEEECCHH
ILANQQKIINGASFVYITNKDGIIIADSRLKNKEQINDFVGKKLDTVEYKGAREDQVFIV
HHHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE
NNKPVLLFQKEINKEDEVIGHYVMGISLMNIYNRFQMELDSRFSMQLVNGDGIILNSPDS
CCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCC
DLIGKKVTDKWIINNIKENVSSNYRYTEDLYQSLERLGRSSRLYLVIDVPRVILTDPARK
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCHHH
IGFTILGIALVGVIIILGGGYLLVRWQLKPLKRLLASFNRLKEGEITDSTYLKGNDVTRG
HHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCC
DELGILNRSFNDMVRRLQGIITSISGAASSVNSSSNHLKENSRDVGIISEKVAKSIQEVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
AGADNQAESVDEINKKMQNLTGVVENLENTNTQLKELSGTMEKATARGQQEIEKVSGQMN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KIRDSIEEVATGISSFTSISEEIDDIVVIINSIAEQTNLLALNAAIEAARAGEAGRGFSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHH
VADEIRNLAVESVKSADRIRDLIEQIKQESERASIKMTQGTEEVQRGESVVTSAKEAFTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHH
IREIIGDVIKGIESSNEAIKDVNTDSKKIAANVETIASISEQTSASAQEVASASEEQTAS
HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IEEITSLSEELSNMADKLNELVREFKLEEKEGIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
AFNKFIKKISFFNKIGLSLKISSILAFVVVLVMGFVSFYTYNYTANMVLRQVNGQIETV
CHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEE
KTSQKKTINNFMENLGKQVSSFTKDEDLFHFVDMVNYNLKNGDLEGFIKIYGFTVVDSSR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEEECCHH
ILANQQKIINGASFVYITNKDGIIIADSRLKNKEQINDFVGKKLDTVEYKGAREDQVFIV
HHHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEE
NNKPVLLFQKEINKEDEVIGHYVMGISLMNIYNRFQMELDSRFSMQLVNGDGIILNSPDS
CCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCC
DLIGKKVTDKWIINNIKENVSSNYRYTEDLYQSLERLGRSSRLYLVIDVPRVILTDPARK
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCHHH
IGFTILGIALVGVIIILGGGYLLVRWQLKPLKRLLASFNRLKEGEITDSTYLKGNDVTRG
HHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCC
DELGILNRSFNDMVRRLQGIITSISGAASSVNSSSNHLKENSRDVGIISEKVAKSIQEVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
AGADNQAESVDEINKKMQNLTGVVENLENTNTQLKELSGTMEKATARGQQEIEKVSGQMN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KIRDSIEEVATGISSFTSISEEIDDIVVIINSIAEQTNLLALNAAIEAARAGEAGRGFSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHH
VADEIRNLAVESVKSADRIRDLIEQIKQESERASIKMTQGTEEVQRGESVVTSAKEAFTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHH
IREIIGDVIKGIESSNEAIKDVNTDSKKIAANVETIASISEQTSASAQEVASASEEQTAS
HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IEEITSLSEELSNMADKLNELVREFKLEEKEGIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]