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The map label for this gene is exuR [H]

Identifier: 220932753

GI number: 220932753

Start: 2051970

End: 2053010

Strand: Reverse

Name: exuR [H]

Synonym: Hore_19190

Alternate gene names: 220932753

Gene position: 2053010-2051970 (Counterclockwise)

Preceding gene: 220932754

Following gene: 220932752

Centisome position: 79.63

GC content: 37.18

Gene sequence:

>1041_bases
ATGGGTGTAACTCAGAAGGATATTGCGGATAGACTCGGTATTTCCCGGACTACAGTAGCCCGGGTTTTAAATAATAGTGG
GCCAGTAGATGAAGGGACCCGCAAAAAGGTTTTGAAGGTTGCCAGGGAACTGGGGTATAATGTAAACCCTATTGCTAAAT
CTCTGGCCATGAAAAAGAAGATGTATATTTATGCTTTTGTAGTTAAGTCATATAATGAAAAATTCAACAGTGAAATAATC
AGGGGTTTAAAGGCAGCCTACCGGGAGTTTAAAAACTATGGTGTAAAATTGAAGATTGTTGAGCTCGGGGCTGAAGAGCC
TGAAAGGCAATTTAATCAAATTGAAGGGTTTTTAGATGAAAGACAGATAGATGGAATAATCCTTACTCCATTAATGGAAC
AGGTAAAGGAAGTTATTAAACGGTTTAAAGATAAAAATATACCGGTAGCAACCCTGGATATGGATATTAAGGGCTCAGAG
CGCAATTTTTTCGTTGGCCCCAATTACTATAAGCTGGGACGGGTAGCCGCTGAGCTTATGGCAAAGTTTATAAAAAAAGA
GGGTAAAATACTCGTTATATCTTCAAGTTATGATTTTTATTCAGTCCGGGAACGGTTAAAAGGTTTTCTCGATAAAATAG
GGGAATATTCCCACATAGAAACTACCGGGCCTTATTACGAATATAGCCTTGAGAAAATATATGATATCACCAGAAGGAAA
TTTGATAAGGAAATAACAGGTATCTATACTACTTTCGGAACTGAATATGCCGTTAAGGCTCTGGTTGATATGGGAATAAA
TAGGGAAGTAATAGTGATTGCCAATGATTTAAATGAAGAAATAGAAGATTGTGTTAAAAAAGGGTACGTACAGGCCATTG
TCTACCAGAGGCCGTTTATGCAGGGATATATTGCCGGGAAAAAGATGTTTGATTGTATCTTTAAAAACATGACTCCTTCT
AAGGATAAATATTTTGTTGGCTATGATATTTTACTGGAAGAGAGCCTGGATAATGTTCACAAAAATATTCTGGAGCTGTA
A

Upstream 100 bases:

>100_bases
TATTATTTATTATAGAGGTAATCAATATCTGGATTAAATAATTTTAGTATATTATTTTTATTTTTAAGTACTAAATGCAG
GTTAAAAAGAGGTGAAGTAC

Downstream 100 bases:

>100_bases
TTAGAGGAATTTTAAGTTTAATAGCAAATTAATATGAATAAGGTTATTTAAAAGGAGAGAGTGGGTAATGATAAAGGGTA
TTATTTTTGATTTTGACGGG

Product: LacI family transcriptional regulator

Products: NA

Alternate protein names: Probable galacturonate locus repressor [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MGVTQKDIADRLGISRTTVARVLNNSGPVDEGTRKKVLKVARELGYNVNPIAKSLAMKKKMYIYAFVVKSYNEKFNSEII
RGLKAAYREFKNYGVKLKIVELGAEEPERQFNQIEGFLDERQIDGIILTPLMEQVKEVIKRFKDKNIPVATLDMDIKGSE
RNFFVGPNYYKLGRVAAELMAKFIKKEGKILVISSSYDFYSVRERLKGFLDKIGEYSHIETTGPYYEYSLEKIYDITRRK
FDKEITGIYTTFGTEYAVKALVDMGINREVIVIANDLNEEIEDCVKKGYVQAIVYQRPFMQGYIAGKKMFDCIFKNMTPS
KDKYFVGYDILLEESLDNVHKNILEL

Sequences:

>Translated_346_residues
MGVTQKDIADRLGISRTTVARVLNNSGPVDEGTRKKVLKVARELGYNVNPIAKSLAMKKKMYIYAFVVKSYNEKFNSEII
RGLKAAYREFKNYGVKLKIVELGAEEPERQFNQIEGFLDERQIDGIILTPLMEQVKEVIKRFKDKNIPVATLDMDIKGSE
RNFFVGPNYYKLGRVAAELMAKFIKKEGKILVISSSYDFYSVRERLKGFLDKIGEYSHIETTGPYYEYSLEKIYDITRRK
FDKEITGIYTTFGTEYAVKALVDMGINREVIVIANDLNEEIEDCVKKGYVQAIVYQRPFMQGYIAGKKMFDCIFKNMTPS
KDKYFVGYDILLEESLDNVHKNILEL
>Mature_345_residues
GVTQKDIADRLGISRTTVARVLNNSGPVDEGTRKKVLKVARELGYNVNPIAKSLAMKKKMYIYAFVVKSYNEKFNSEIIR
GLKAAYREFKNYGVKLKIVELGAEEPERQFNQIEGFLDERQIDGIILTPLMEQVKEVIKRFKDKNIPVATLDMDIKGSER
NFFVGPNYYKLGRVAAELMAKFIKKEGKILVISSSYDFYSVRERLKGFLDKIGEYSHIETTGPYYEYSLEKIYDITRRKF
DKEITGIYTTFGTEYAVKALVDMGINREVIVIANDLNEEIEDCVKKGYVQAIVYQRPFMQGYIAGKKMFDCIFKNMTPSK
DKYFVGYDILLEESLDNVHKNILEL

Specific function: Transcriptional repressor for the exu locus which is required for galacturonate utilization (Probable) [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 39894; Mature: 39763

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTQKDIADRLGISRTTVARVLNNSGPVDEGTRKKVLKVARELGYNVNPIAKSLAMKKK
CCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MYIYAFVVKSYNEKFNSEIIRGLKAAYREFKNYGVKLKIVELGAEEPERQFNQIEGFLDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH
RQIDGIILTPLMEQVKEVIKRFKDKNIPVATLDMDIKGSERNFFVGPNYYKLGRVAAELM
HHCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHH
AKFIKKEGKILVISSSYDFYSVRERLKGFLDKIGEYSHIETTGPYYEYSLEKIYDITRRK
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
FDKEITGIYTTFGTEYAVKALVDMGINREVIVIANDLNEEIEDCVKKGYVQAIVYQRPFM
HHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCHHH
QGYIAGKKMFDCIFKNMTPSKDKYFVGYDILLEESLDNVHKNILEL
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVTQKDIADRLGISRTTVARVLNNSGPVDEGTRKKVLKVARELGYNVNPIAKSLAMKKK
CCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MYIYAFVVKSYNEKFNSEIIRGLKAAYREFKNYGVKLKIVELGAEEPERQFNQIEGFLDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH
RQIDGIILTPLMEQVKEVIKRFKDKNIPVATLDMDIKGSERNFFVGPNYYKLGRVAAELM
HHCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHH
AKFIKKEGKILVISSSYDFYSVRERLKGFLDKIGEYSHIETTGPYYEYSLEKIYDITRRK
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
FDKEITGIYTTFGTEYAVKALVDMGINREVIVIANDLNEEIEDCVKKGYVQAIVYQRPFM
HHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCHHH
QGYIAGKKMFDCIFKNMTPSKDKYFVGYDILLEESLDNVHKNILEL
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]