| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yicI [C]
Identifier: 220932744
GI number: 220932744
Start: 2040845
End: 2043250
Strand: Reverse
Name: yicI [C]
Synonym: Hore_19090
Alternate gene names: 220932744
Gene position: 2043250-2040845 (Counterclockwise)
Preceding gene: 220932745
Following gene: 220932743
Centisome position: 79.25
GC content: 40.73
Gene sequence:
>2406_bases ATGAACAGTGAGGTAATTATGGACAAAGGCCCGGAAAAATCAGGTTCAAAAAGTTATTTTATCTTAAATGAAATTCTGGA TTATTGCAGGAAAGATAACAGGATTTCTTTTAAGCTGAAAAAAGGAGAAGTTGTTTTAGAGTTTTTGACTGCTGATATAG TCAGGGTGGTTATGGGGAAAAGGGATAAAGCCAGCCTGGAGACCACCTGTGCTGTCGTGGATCACAACCTGGCCTACTCT GATTTTACAATTAATGAAACAGAAAAGGTCCTTAACATTGAGACCGATCGGTTAATAGTCAGGGTTAACCGACATAAATT TGGCCTCGGTTTTTATGATAAGGAGGGGAATTTAATTAACCGGGATTACTCCAGACGGGCCCTGGGATGGAGTGGTAATG AAGTCCGGGCCTGGAAAGAAGTTAAGCCCGGCGAAAGGTTTTACGGCCTTGGAGAAAAAACAGGTTTCCTCGATAAAAGG GGTAAAAAGTATACAATGTGGAATTCTGATGTCTTTGAGGCCCATGTTGAGAGTACTGATCCCCTCTATAAATCAATTCC CTTTTTAGTTGGGTTTAATAAAGGGAAGACCTATGGTATTTACTTTGATAATACCTATAAAAGTCATTTCGATCTGGCTT CAGGTAATAAAGATTATTATTCATTCTGGGCCGAAGGAGGTAAAATGGATTATTATTTCATTTACGGTCCGGACCTTAAA GAGGTAATATCAAAATATACCCTGCTAACAGGAAGGATGCCGTTACCACCTAAATGGTCCCTGGGTTATCACCAGTCCCG TTATAGTTACCATCCTGACAGTGAAGTTAAAAGAATTGCCAGAACATTGAGGAAAAAGGATATTCCCTGTGATGTAATTC ACCTCGATATTCATTATATGGATGGCTACCGGGTTTTTACCTGGAATGAAGAAGAGTTTCCCTGTCCTGGGGAAATGATA TCTGATTTATCAGAAGAGGGTTTTAAAATTGTTAATATCATAGACCCCGGTGTTAAAGTAGACCCCGAATATGAGGTGTA CCGGGAAGGAATGAGAGAAGACTATTTTTGTAAGTATCTTGATGGAAGACCCTTTGTCGGGAAAGTCTGGCCGGGTCAAA CAGTATTTCCCGATTTTACCTGCCAGAAAGTCAGGGAATGGTGGGGTGATTTGCACAAAAAATATGTTGATCAGGGAGTT AAAGGGATATGGAATGACATGAATGAGCCCTCTGTATTTAACGAAACCTCAACCATGGACCTTAATGTCGTCCATGAAAA TGACGGTGATATGGGGACTCATAGACGTTTTCATAATGTATATGGTCTCCTTGAAAATAAAGCAACCTACCAGGGCCTTA AAAAACACCTTCAGGAGCGGCCATTTATTTTATCAAGGGCTGGATTTGCCGGCATTCAGAGGTATGCAGCGGTCTGGACC GGGGACAACAGAAGTTTTTGGGAACATTTAAAACTGGCAGTCCCCATGTTAATGAACCTGGGGATGTCGGGAGTGACCTT TGCCGGAACTGATGTTGGTGGCTTTACCGGTGATTCCAATGGTGAGCTTTTGACCAGGTGGACCCAGCTGGGAGCTTTTA TGCCTCTTTTTAGAAATCACTGTACTATCGGGGCCCTTGATCAGGAACCCTGGTCCTTTGGTGAAAAATATGAGGCTATT ATAAGGAAATATATTAAACTGCGCTATCGTTTATTACCATATACCTACGGTTTATTTTACCGGGCCAGTCAGGAAGGCTT ACCGGTAATGAGGCCTCTGGTTATGGAATACCCTTTTGACCCCAGAACTTATAATATCTCCGATCAGTATCTGTATGGGG ACAGTATTATGATAGCCCCGGTTTACGAACCAGACCGTAAAGAACGGCTGGTCTATTTACCGGAAGGTATCTGGTTTGAT TTCTGGACCGGAGAGAAATATGAAGGTGGAAAAAATATTATAGCAAAAGCCCCTCTTGATACTCTGCCCGTTTATATTAA GGCAGGGAGTATTATACCATTGACTGAATCCGTTAATTATGTGGGAGAAAAGGAGAATAGTGACCTGGAATTAAATATAT ATCTCAGTTCTGAAGTTGAAGAAGATAGCTACCAGTTATATGAGGATGATGGGTATAGCTTTGATTATCAGAATGGAAAG TACTCTCTGGTAGAATTTAAATACAATTATAGCGATAATGGCCTCACCTTTAACATAAATCCCTTCAAGACCGGTTATAA GCTCCCTTATCCTGATTATATCCTGAACTTTAAAAACCTGACCCGGGAACCTTCCAGTATTATGGTAGATGGTTCTGAAC TCAATGACTATGTTTATGATGATCAGAGAGGTGAGTTAAGATTAAAGGTCAATAAAAAAGCCAGGAAAATAAAGGTTAAT CTATAA
Upstream 100 bases:
>100_bases TTGCAAAATTATATTGAAAAAATTTAAAAGTTCTAATAATATTTTAAGTAAGCTCTGTGAAGAGAAATCTGATTAAGGTT ACTGGATAGGGGTGATGGTA
Downstream 100 bases:
>100_bases AGATTAAAAAAGAAAAATGTTAAGGAAACACCTGCCTCGCTGAATAGCCAGGCAGGTGTTTTTTTAAAAAAATCATGAGA GATCTGACCTATTTACAGAA
Product: Alpha-glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase II [H]
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MNSEVIMDKGPEKSGSKSYFILNEILDYCRKDNRISFKLKKGEVVLEFLTADIVRVVMGKRDKASLETTCAVVDHNLAYS DFTINETEKVLNIETDRLIVRVNRHKFGLGFYDKEGNLINRDYSRRALGWSGNEVRAWKEVKPGERFYGLGEKTGFLDKR GKKYTMWNSDVFEAHVESTDPLYKSIPFLVGFNKGKTYGIYFDNTYKSHFDLASGNKDYYSFWAEGGKMDYYFIYGPDLK EVISKYTLLTGRMPLPPKWSLGYHQSRYSYHPDSEVKRIARTLRKKDIPCDVIHLDIHYMDGYRVFTWNEEEFPCPGEMI SDLSEEGFKIVNIIDPGVKVDPEYEVYREGMREDYFCKYLDGRPFVGKVWPGQTVFPDFTCQKVREWWGDLHKKYVDQGV KGIWNDMNEPSVFNETSTMDLNVVHENDGDMGTHRRFHNVYGLLENKATYQGLKKHLQERPFILSRAGFAGIQRYAAVWT GDNRSFWEHLKLAVPMLMNLGMSGVTFAGTDVGGFTGDSNGELLTRWTQLGAFMPLFRNHCTIGALDQEPWSFGEKYEAI IRKYIKLRYRLLPYTYGLFYRASQEGLPVMRPLVMEYPFDPRTYNISDQYLYGDSIMIAPVYEPDRKERLVYLPEGIWFD FWTGEKYEGGKNIIAKAPLDTLPVYIKAGSIIPLTESVNYVGEKENSDLELNIYLSSEVEEDSYQLYEDDGYSFDYQNGK YSLVEFKYNYSDNGLTFNINPFKTGYKLPYPDYILNFKNLTREPSSIMVDGSELNDYVYDDQRGELRLKVNKKARKIKVN L
Sequences:
>Translated_801_residues MNSEVIMDKGPEKSGSKSYFILNEILDYCRKDNRISFKLKKGEVVLEFLTADIVRVVMGKRDKASLETTCAVVDHNLAYS DFTINETEKVLNIETDRLIVRVNRHKFGLGFYDKEGNLINRDYSRRALGWSGNEVRAWKEVKPGERFYGLGEKTGFLDKR GKKYTMWNSDVFEAHVESTDPLYKSIPFLVGFNKGKTYGIYFDNTYKSHFDLASGNKDYYSFWAEGGKMDYYFIYGPDLK EVISKYTLLTGRMPLPPKWSLGYHQSRYSYHPDSEVKRIARTLRKKDIPCDVIHLDIHYMDGYRVFTWNEEEFPCPGEMI SDLSEEGFKIVNIIDPGVKVDPEYEVYREGMREDYFCKYLDGRPFVGKVWPGQTVFPDFTCQKVREWWGDLHKKYVDQGV KGIWNDMNEPSVFNETSTMDLNVVHENDGDMGTHRRFHNVYGLLENKATYQGLKKHLQERPFILSRAGFAGIQRYAAVWT GDNRSFWEHLKLAVPMLMNLGMSGVTFAGTDVGGFTGDSNGELLTRWTQLGAFMPLFRNHCTIGALDQEPWSFGEKYEAI IRKYIKLRYRLLPYTYGLFYRASQEGLPVMRPLVMEYPFDPRTYNISDQYLYGDSIMIAPVYEPDRKERLVYLPEGIWFD FWTGEKYEGGKNIIAKAPLDTLPVYIKAGSIIPLTESVNYVGEKENSDLELNIYLSSEVEEDSYQLYEDDGYSFDYQNGK YSLVEFKYNYSDNGLTFNINPFKTGYKLPYPDYILNFKNLTREPSSIMVDGSELNDYVYDDQRGELRLKVNKKARKIKVN L >Mature_801_residues MNSEVIMDKGPEKSGSKSYFILNEILDYCRKDNRISFKLKKGEVVLEFLTADIVRVVMGKRDKASLETTCAVVDHNLAYS DFTINETEKVLNIETDRLIVRVNRHKFGLGFYDKEGNLINRDYSRRALGWSGNEVRAWKEVKPGERFYGLGEKTGFLDKR GKKYTMWNSDVFEAHVESTDPLYKSIPFLVGFNKGKTYGIYFDNTYKSHFDLASGNKDYYSFWAEGGKMDYYFIYGPDLK EVISKYTLLTGRMPLPPKWSLGYHQSRYSYHPDSEVKRIARTLRKKDIPCDVIHLDIHYMDGYRVFTWNEEEFPCPGEMI SDLSEEGFKIVNIIDPGVKVDPEYEVYREGMREDYFCKYLDGRPFVGKVWPGQTVFPDFTCQKVREWWGDLHKKYVDQGV KGIWNDMNEPSVFNETSTMDLNVVHENDGDMGTHRRFHNVYGLLENKATYQGLKKHLQERPFILSRAGFAGIQRYAAVWT GDNRSFWEHLKLAVPMLMNLGMSGVTFAGTDVGGFTGDSNGELLTRWTQLGAFMPLFRNHCTIGALDQEPWSFGEKYEAI IRKYIKLRYRLLPYTYGLFYRASQEGLPVMRPLVMEYPFDPRTYNISDQYLYGDSIMIAPVYEPDRKERLVYLPEGIWFD FWTGEKYEGGKNIIAKAPLDTLPVYIKAGSIIPLTESVNYVGEKENSDLELNIYLSSEVEEDSYQLYEDDGYSFDYQNGK YSLVEFKYNYSDNGLTFNINPFKTGYKLPYPDYILNFKNLTREPSSIMVDGSELNDYVYDDQRGELRLKVNKKARKIKVN L
Specific function: Unknown
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI66346737, Length=649, Percent_Identity=36.979969183359, Blast_Score=431, Evalue=1e-120, Organism=Homo sapiens, GI88900491, Length=627, Percent_Identity=37.3205741626794, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI38202257, Length=627, Percent_Identity=37.3205741626794, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI119393895, Length=699, Percent_Identity=31.7596566523605, Blast_Score=356, Evalue=5e-98, Organism=Homo sapiens, GI119393893, Length=699, Percent_Identity=31.7596566523605, Blast_Score=356, Evalue=5e-98, Organism=Homo sapiens, GI119393891, Length=699, Percent_Identity=31.7596566523605, Blast_Score=356, Evalue=5e-98, Organism=Homo sapiens, GI221316699, Length=709, Percent_Identity=31.1706629055007, Blast_Score=300, Evalue=4e-81, Organism=Homo sapiens, GI157364974, Length=677, Percent_Identity=29.5420974889217, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI310115361, Length=524, Percent_Identity=30.3435114503817, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI153791946, Length=505, Percent_Identity=25.5445544554455, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI2367256, Length=603, Percent_Identity=27.5290215588723, Blast_Score=231, Evalue=2e-61, Organism=Escherichia coli, GI2367323, Length=579, Percent_Identity=27.6338514680484, Blast_Score=166, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17560800, Length=620, Percent_Identity=36.2903225806452, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17560798, Length=620, Percent_Identity=36.2903225806452, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI71991189, Length=599, Percent_Identity=36.7278797996661, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI32563849, Length=718, Percent_Identity=28.133704735376, Blast_Score=248, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71985706, Length=751, Percent_Identity=28.3621837549933, Blast_Score=241, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6319706, Length=610, Percent_Identity=34.9180327868852, Blast_Score=358, Evalue=2e-99, Organism=Drosophila melanogaster, GI24643749, Length=599, Percent_Identity=34.0567612687813, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI24643753, Length=599, Percent_Identity=34.0567612687813, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI24643751, Length=599, Percent_Identity=34.0567612687813, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI24643746, Length=599, Percent_Identity=34.0567612687813, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI21357605, Length=599, Percent_Identity=34.0567612687813, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI24650054, Length=436, Percent_Identity=25.6880733944954, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI28571440, Length=374, Percent_Identity=23.2620320855615, Blast_Score=78, Evalue=3e-14, Organism=Drosophila melanogaster, GI28571438, Length=379, Percent_Identity=23.4828496042216, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 93152; Mature: 93152
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00129 GLYCOSYL_HYDROL_F31_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEVIMDKGPEKSGSKSYFILNEILDYCRKDNRISFKLKKGEVVLEFLTADIVRVVMGK CCCCEEECCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEEECCCEEEHHHHHHHHHHHHCC RDKASLETTCAVVDHNLAYSDFTINETEKVLNIETDRLIVRVNRHKFGLGFYDKEGNLIN CCCCCHHEEEEEEECCCEECCEECCCCHHEEEEECCEEEEEEECEEEECEEECCCCCEEC RDYSRRALGWSGNEVRAWKEVKPGERFYGLGEKTGFLDKRGKKYTMWNSDVFEAHVESTD CCCCCCCCCCCCCCEEEHHCCCCCCCEECCCCCCCCCCCCCCEEEECCCHHHHEECCCCC PLYKSIPFLVGFNKGKTYGIYFDNTYKSHFDLASGNKDYYSFWAEGGKMDYYFIYGPDLK CHHHCCCEEEEECCCCEEEEEECCCCCCCEECCCCCCHHHHHCCCCCCEEEEEEECCCHH EVISKYTLLTGRMPLPPKWSLGYHQSRYSYHPDSEVKRIARTLRKKDIPCDVIHLDIHYM HHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEE DGYRVFTWNEEEFPCPGEMISDLSEEGFKIVNIIDPGVKVDPEYEVYREGMREDYFCKYL CCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCEECCCHHHHHCCCCCCCEEEEE DGRPFVGKVWPGQTVFPDFTCQKVREWWGDLHKKYVDQGVKGIWNDMNEPSVFNETSTMD CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE LNVVHENDGDMGTHRRFHNVYGLLENKATYQGLKKHLQERPFILSRAGFAGIQRYAAVWT EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHEEEEEE GDNRSFWEHLKLAVPMLMNLGMSGVTFAGTDVGGFTGDSNGELLTRWTQLGAFMPLFRNH CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC CTIGALDQEPWSFGEKYEAIIRKYIKLRYRLLPYTYGLFYRASQEGLPVMRPLVMEYPFD CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCC PRTYNISDQYLYGDSIMIAPVYEPDRKERLVYLPEGIWFDFWTGEKYEGGKNIIAKAPLD CCEECCCCCEEECCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCC TLPVYIKAGSIIPLTESVNYVGEKENSDLELNIYLSSEVEEDSYQLYEDDGYSFDYQNGK CCCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCEEECCCCC YSLVEFKYNYSDNGLTFNINPFKTGYKLPYPDYILNFKNLTREPSSIMVDGSELNDYVYD EEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHCCHHHHCCCCCEEEEECCCCCCCEEC DQRGELRLKVNKKARKIKVNL CCCCCEEEEEECCEEEEEECC >Mature Secondary Structure MNSEVIMDKGPEKSGSKSYFILNEILDYCRKDNRISFKLKKGEVVLEFLTADIVRVVMGK CCCCEEECCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEEECCCEEEHHHHHHHHHHHHCC RDKASLETTCAVVDHNLAYSDFTINETEKVLNIETDRLIVRVNRHKFGLGFYDKEGNLIN CCCCCHHEEEEEEECCCEECCEECCCCHHEEEEECCEEEEEEECEEEECEEECCCCCEEC RDYSRRALGWSGNEVRAWKEVKPGERFYGLGEKTGFLDKRGKKYTMWNSDVFEAHVESTD CCCCCCCCCCCCCCEEEHHCCCCCCCEECCCCCCCCCCCCCCEEEECCCHHHHEECCCCC PLYKSIPFLVGFNKGKTYGIYFDNTYKSHFDLASGNKDYYSFWAEGGKMDYYFIYGPDLK CHHHCCCEEEEECCCCEEEEEECCCCCCCEECCCCCCHHHHHCCCCCCEEEEEEECCCHH EVISKYTLLTGRMPLPPKWSLGYHQSRYSYHPDSEVKRIARTLRKKDIPCDVIHLDIHYM HHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEE DGYRVFTWNEEEFPCPGEMISDLSEEGFKIVNIIDPGVKVDPEYEVYREGMREDYFCKYL CCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCEECCCHHHHHCCCCCCCEEEEE DGRPFVGKVWPGQTVFPDFTCQKVREWWGDLHKKYVDQGVKGIWNDMNEPSVFNETSTMD CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE LNVVHENDGDMGTHRRFHNVYGLLENKATYQGLKKHLQERPFILSRAGFAGIQRYAAVWT EEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHEEEEEE GDNRSFWEHLKLAVPMLMNLGMSGVTFAGTDVGGFTGDSNGELLTRWTQLGAFMPLFRNH CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC CTIGALDQEPWSFGEKYEAIIRKYIKLRYRLLPYTYGLFYRASQEGLPVMRPLVMEYPFD CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCC PRTYNISDQYLYGDSIMIAPVYEPDRKERLVYLPEGIWFDFWTGEKYEGGKNIIAKAPLD CCEECCCCCEEECCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCC TLPVYIKAGSIIPLTESVNYVGEKENSDLELNIYLSSEVEEDSYQLYEDDGYSFDYQNGK CCCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCEEECCCCC YSLVEFKYNYSDNGLTFNINPFKTGYKLPYPDYILNFKNLTREPSSIMVDGSELNDYVYD EEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHCCHHHHCCCCCEEEEECCCCCCCEEC DQRGELRLKVNKKARKIKVNL CCCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10945254 [H]