| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932703
Identifier: 220932703
GI number: 220932703
Start: 1995444
End: 1995884
Strand: Reverse
Name: 220932703
Synonym: Hore_18670
Alternate gene names: NA
Gene position: 1995884-1995444 (Counterclockwise)
Preceding gene: 220932704
Following gene: 220932702
Centisome position: 77.42
GC content: 34.69
Gene sequence:
>441_bases ATGTTACCAACTGGTAGATCTTCAGGTTTTACCCTGGTTGAAGTCTTATTAATAGTGGTCATTATCAGCTTTTCGTTATT ATTGATTATACCATCATTTGATAAATACCTGAAAACAGTTAACCTTAAAACCGGGGAAAGTCGAATTGTTTTTATTCTTA CTTCGGCAAGAAAAACGGCAATTGCTTCCGGGTTTCCTCAAAAAATTGAAATTCATAAATCAAAATTAATATACCCAACC CCTACAGGAGAAAAAGTGGTTTTTAGCAGGGGTATTAAAAATATTGACTACAATGGTAAAAGGAAGGATATTATGTTCTA TCCTGATGGGACAAGTTCTGGTGGTAAACTGGAGATTCTCTTTGATAATAATGTTAAAGTGGTTTTAAAAATTTCACCCG TTACCGGCCAATTAAAACCGGTGATGAGCCATGGTAGTTAG
Upstream 100 bases:
>100_bases GAATACAATTACCTTTCCCCTGGAAATTATAATACCCATAAATATGATTTGTGGTCATATGGCCTTGATAATAAAAAGGG AGGAACAGGGGAAGCAAGTG
Downstream 100 bases:
>100_bases GGAGCAAGGCTTTACCCTGGTAGAGGTTTTAGTGGCGATGGTAGTTATCGGGGTATGTCTCGGTATTCTATTTAATGGTT ATACCCGGATAGCCAGAAGT
Product: prepilin-type N-terminal cleavage/methylation domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLPTGRSSGFTLVEVLLIVVIISFSLLLIIPSFDKYLKTVNLKTGESRIVFILTSARKTAIASGFPQKIEIHKSKLIYPT PTGEKVVFSRGIKNIDYNGKRKDIMFYPDGTSSGGKLEILFDNNVKVVLKISPVTGQLKPVMSHGS
Sequences:
>Translated_146_residues MLPTGRSSGFTLVEVLLIVVIISFSLLLIIPSFDKYLKTVNLKTGESRIVFILTSARKTAIASGFPQKIEIHKSKLIYPT PTGEKVVFSRGIKNIDYNGKRKDIMFYPDGTSSGGKLEILFDNNVKVVLKISPVTGQLKPVMSHGS >Mature_146_residues MLPTGRSSGFTLVEVLLIVVIISFSLLLIIPSFDKYLKTVNLKTGESRIVFILTSARKTAIASGFPQKIEIHKSKLIYPT PTGEKVVFSRGIKNIDYNGKRKDIMFYPDGTSSGGKLEILFDNNVKVVLKISPVTGQLKPVMSHGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16056; Mature: 16056
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTGRSSGFTLVEVLLIVVIISFSLLLIIPSFDKYLKTVNLKTGESRIVFILTSARKTA CCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHEEECCCCCCCEEEEEEECCCCHH IASGFPQKIEIHKSKLIYPTPTGEKVVFSRGIKNIDYNGKRKDIMFYPDGTSSGGKLEIL HHCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEE FDNNVKVVLKISPVTGQLKPVMSHGS ECCCEEEEEEEECCCCCEEEECCCCC >Mature Secondary Structure MLPTGRSSGFTLVEVLLIVVIISFSLLLIIPSFDKYLKTVNLKTGESRIVFILTSARKTA CCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHEEECCCCCCCEEEEEEECCCCHH IASGFPQKIEIHKSKLIYPTPTGEKVVFSRGIKNIDYNGKRKDIMFYPDGTSSGGKLEIL HHCCCCCEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEE FDNNVKVVLKISPVTGQLKPVMSHGS ECCCEEEEEEEECCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA