| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932689
Identifier: 220932689
GI number: 220932689
Start: 1978270
End: 1978782
Strand: Reverse
Name: 220932689
Synonym: Hore_18530
Alternate gene names: NA
Gene position: 1978782-1978270 (Counterclockwise)
Preceding gene: 220932690
Following gene: 220932688
Centisome position: 76.75
GC content: 32.16
Gene sequence:
>513_bases ATGAATTACTTAAGAGAAGAGATAAAGAAGGATCTGGGGATAGAAGAAAAGCCTCCTGCATATAGTGATGAAGAATTAGA ATTAGTAACAAGAACAGTATATGCAGAAGCTTTAGGTACAACTAATTTAGAAAGAAAAGCAGTAACTTGGGTAATTAGAA ATAGGGTGGAATCAAGTTATTATCCGGATAACTACGAAGAAGTAATAAGAGAAGAAAATGCGTTTGAAAGTGTTACTGAA AAAAGTCCACTCTGGAGAGAAAGTAAAGCTCCTGACAAGAGAAATGAACCAGAATATCAAGAAATAAACAAAATTGTCAA AGAAATAATGGATACATCATCTGATGATGATATTACTCATAGGGCTTTGTTGTTTCATGATACGAACACTCAACCTGAAA CGCCTAGCGGATGGAATAAAGATGTTATTAATGAAGTTACTGATAAAATATATCCAGAATCTATTATTGCTGATGATGCA AATCAGTTTAGATTTTATCAAGAATTTAGATAA
Upstream 100 bases:
>100_bases TCCGGTTATACTGAGGATATGGTAAAGGGAAAAAGGAGCTCAACCTAAAGCCAAGGCAAATTACTATAACGAATATTACT ATGGGAATGGTTTAATAGCC
Downstream 100 bases:
>100_bases TTTATAAGGGAGGAATATCACTTATGAATAAAATGAGGGGAAGGTATATATTTATATATGTTTTCATTATAGTGATTTTG TTATTATTTAATTTACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSYYPDNYEEVIREENAFESVTE KSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITHRALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDA NQFRFYQEFR
Sequences:
>Translated_170_residues MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSYYPDNYEEVIREENAFESVTE KSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITHRALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDA NQFRFYQEFR >Mature_170_residues MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSYYPDNYEEVIREENAFESVTE KSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITHRALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDA NQFRFYQEFR
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20074; Mature: 20074
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSY CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC YPDNYEEVIREENAFESVTEKSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITH CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH RALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDANQFRFYQEFR HEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSY CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC YPDNYEEVIREENAFESVTEKSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITH CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH RALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDANQFRFYQEFR HEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA