Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932689

Identifier: 220932689

GI number: 220932689

Start: 1978270

End: 1978782

Strand: Reverse

Name: 220932689

Synonym: Hore_18530

Alternate gene names: NA

Gene position: 1978782-1978270 (Counterclockwise)

Preceding gene: 220932690

Following gene: 220932688

Centisome position: 76.75

GC content: 32.16

Gene sequence:

>513_bases
ATGAATTACTTAAGAGAAGAGATAAAGAAGGATCTGGGGATAGAAGAAAAGCCTCCTGCATATAGTGATGAAGAATTAGA
ATTAGTAACAAGAACAGTATATGCAGAAGCTTTAGGTACAACTAATTTAGAAAGAAAAGCAGTAACTTGGGTAATTAGAA
ATAGGGTGGAATCAAGTTATTATCCGGATAACTACGAAGAAGTAATAAGAGAAGAAAATGCGTTTGAAAGTGTTACTGAA
AAAAGTCCACTCTGGAGAGAAAGTAAAGCTCCTGACAAGAGAAATGAACCAGAATATCAAGAAATAAACAAAATTGTCAA
AGAAATAATGGATACATCATCTGATGATGATATTACTCATAGGGCTTTGTTGTTTCATGATACGAACACTCAACCTGAAA
CGCCTAGCGGATGGAATAAAGATGTTATTAATGAAGTTACTGATAAAATATATCCAGAATCTATTATTGCTGATGATGCA
AATCAGTTTAGATTTTATCAAGAATTTAGATAA

Upstream 100 bases:

>100_bases
TCCGGTTATACTGAGGATATGGTAAAGGGAAAAAGGAGCTCAACCTAAAGCCAAGGCAAATTACTATAACGAATATTACT
ATGGGAATGGTTTAATAGCC

Downstream 100 bases:

>100_bases
TTTATAAGGGAGGAATATCACTTATGAATAAAATGAGGGGAAGGTATATATTTATATATGTTTTCATTATAGTGATTTTG
TTATTATTTAATTTACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSYYPDNYEEVIREENAFESVTE
KSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITHRALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDA
NQFRFYQEFR

Sequences:

>Translated_170_residues
MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSYYPDNYEEVIREENAFESVTE
KSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITHRALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDA
NQFRFYQEFR
>Mature_170_residues
MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSYYPDNYEEVIREENAFESVTE
KSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITHRALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDA
NQFRFYQEFR

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20074; Mature: 20074

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSY
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
YPDNYEEVIREENAFESVTEKSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH
RALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDANQFRFYQEFR
HEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MNYLREEIKKDLGIEEKPPAYSDEELELVTRTVYAEALGTTNLERKAVTWVIRNRVESSY
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
YPDNYEEVIREENAFESVTEKSPLWRESKAPDKRNEPEYQEINKIVKEIMDTSSDDDITH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH
RALLFHDTNTQPETPSGWNKDVINEVTDKIYPESIIADDANQFRFYQEFR
HEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA