| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is adcA [H]
Identifier: 220932671
GI number: 220932671
Start: 1960991
End: 1961917
Strand: Reverse
Name: adcA [H]
Synonym: Hore_18350
Alternate gene names: 220932671
Gene position: 1961917-1960991 (Counterclockwise)
Preceding gene: 220932672
Following gene: 220932670
Centisome position: 76.1
GC content: 37.76
Gene sequence:
>927_bases GTGAAGAAAATATATATACTGGTATTTCTGGTTATTATATTCTTCCCTGTACTGTTTATAGGTTTAAAAGGGGACGAGCG ATCTGGTGTAGTGAGTGATAAACTGAAAGTAATAACCAGTGTTAATATCCTGGAAGATTTTGTTAAAGAGATCGGGGGGG AAAAAGTCGAGGTTGAGAGTTTAATAACCGGACTTGAAACTCCCCATACCTTTAGTATGTCTCCGGGGGATAGAAAAAAA CTTATGGAAGCAGATATGATAGTAACCATCGGCATGGGGCTGGAAGTATGGATTGATGACATTTTAAAGGAAATAGCCTC TGAAAAGATTATAGTTACAACTTCCAGGGTGCCGGGAATAAAGGTTATTGGTGGTAGTGTAGATGATGAACATGGCCATG ATAATCATAATCATGGAAACCCCCATATCTGGTTAAATCCGGACAATGCCAGGTTAATGATAACTGCTATTAAGGATAGT TTGATTAAAGCTGATCCTGTAAATAAGGAATATTATACAAAGAATTATAAATATTACTTATCTGAACTTAATACTGAAAT ATTAGAGCTGAAAAACAGGGTAGCCAGACTTGATGACCGCCGTGTTTTTTCATATGCAGCAGCCTTCCCCTACCTGCTGG ATTATTTTGGATTTGAAACACCTCTCCCTTCCCGGGTGGTACCGGGGCAGGATATTTCAGCCCGGGAAATAACGTCTTTA ATAAAACAGCTAAAAAAAGAAGATATTGAAGTAATTATTGAAGCCAGACAATCGGGGAGTAAGATAGCTGAAACTTTAGC CCGGGAAACCGGAGGAAAAGTTGTGTACCTGACTCCATTACTGATACCTGAAATAATTCCAGAAACCGGTAGTTATAAAG GACTTATCAGGTACAATATAGAAACTATTATTAATGTCTTAAAATAA
Upstream 100 bases:
>100_bases GAACATGATCATAACCATTGACCACCGGCATAAAAATTAAGGTTCAAGTTATAACCTGGTTAAATTTTAAATACTGGAGG AAGAGTTGGGGGGATTTGCC
Downstream 100 bases:
>100_bases TATGACCGGTTAAGGATGTGATGTTAACATGGAAGGGGCAATTAAATTTGAAGGGGTATCGGCAGGTTATCAGGATAGAA TAGTATTAAATAATATATCA
Product: periplasmic solute binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKKIYILVFLVIIFFPVLFIGLKGDERSGVVSDKLKVITSVNILEDFVKEIGGEKVEVESLITGLETPHTFSMSPGDRKK LMEADMIVTIGMGLEVWIDDILKEIASEKIIVTTSRVPGIKVIGGSVDDEHGHDNHNHGNPHIWLNPDNARLMITAIKDS LIKADPVNKEYYTKNYKYYLSELNTEILELKNRVARLDDRRVFSYAAAFPYLLDYFGFETPLPSRVVPGQDISAREITSL IKQLKKEDIEVIIEARQSGSKIAETLARETGGKVVYLTPLLIPEIIPETGSYKGLIRYNIETIINVLK
Sequences:
>Translated_308_residues MKKIYILVFLVIIFFPVLFIGLKGDERSGVVSDKLKVITSVNILEDFVKEIGGEKVEVESLITGLETPHTFSMSPGDRKK LMEADMIVTIGMGLEVWIDDILKEIASEKIIVTTSRVPGIKVIGGSVDDEHGHDNHNHGNPHIWLNPDNARLMITAIKDS LIKADPVNKEYYTKNYKYYLSELNTEILELKNRVARLDDRRVFSYAAAFPYLLDYFGFETPLPSRVVPGQDISAREITSL IKQLKKEDIEVIIEARQSGSKIAETLARETGGKVVYLTPLLIPEIIPETGSYKGLIRYNIETIINVLK >Mature_308_residues MKKIYILVFLVIIFFPVLFIGLKGDERSGVVSDKLKVITSVNILEDFVKEIGGEKVEVESLITGLETPHTFSMSPGDRKK LMEADMIVTIGMGLEVWIDDILKEIASEKIIVTTSRVPGIKVIGGSVDDEHGHDNHNHGNPHIWLNPDNARLMITAIKDS LIKADPVNKEYYTKNYKYYLSELNTEILELKNRVARLDDRRVFSYAAAFPYLLDYFGFETPLPSRVVPGQDISAREITSL IKQLKKEDIEVIIEARQSGSKIAETLARETGGKVVYLTPLLIPEIIPETGSYKGLIRYNIETIINVLK
Specific function: Part of the ATP-driven transport system AdcABC for zinc [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=237, Percent_Identity=27.0042194092827, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR012674 - InterPro: IPR011038 - InterPro: IPR006128 - InterPro: IPR015304 [H]
Pfam domain/function: PF01297 SBP_bac_9; PF09223 YodA [H]
EC number: NA
Molecular weight: Translated: 34676; Mature: 34676
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYILVFLVIIFFPVLFIGLKGDERSGVVSDKLKVITSVNILEDFVKEIGGEKVEVES CCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH LITGLETPHTFSMSPGDRKKLMEADMIVTIGMGLEVWIDDILKEIASEKIIVTTSRVPGI HHHCCCCCCEECCCCCHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCE KVIGGSVDDEHGHDNHNHGNPHIWLNPDNARLMITAIKDSLIKADPVNKEYYTKNYKYYL EEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHH SELNTEILELKNRVARLDDRRVFSYAAAFPYLLDYFGFETPLPSRVVPGQDISAREITSL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH IKQLKKEDIEVIIEARQSGSKIAETLARETGGKVVYLTPLLIPEIIPETGSYKGLIRYNI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCEEEEECH ETIINVLK HHHHHHHC >Mature Secondary Structure MKKIYILVFLVIIFFPVLFIGLKGDERSGVVSDKLKVITSVNILEDFVKEIGGEKVEVES CCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH LITGLETPHTFSMSPGDRKKLMEADMIVTIGMGLEVWIDDILKEIASEKIIVTTSRVPGI HHHCCCCCCEECCCCCHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCE KVIGGSVDDEHGHDNHNHGNPHIWLNPDNARLMITAIKDSLIKADPVNKEYYTKNYKYYL EEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHH SELNTEILELKNRVARLDDRRVFSYAAAFPYLLDYFGFETPLPSRVVPGQDISAREITSL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH IKQLKKEDIEVIIEARQSGSKIAETLARETGGKVVYLTPLLIPEIIPETGSYKGLIRYNI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCEEEEECH ETIINVLK HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]