| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932666
Identifier: 220932666
GI number: 220932666
Start: 1957247
End: 1957768
Strand: Reverse
Name: 220932666
Synonym: Hore_18300
Alternate gene names: NA
Gene position: 1957768-1957247 (Counterclockwise)
Preceding gene: 220932667
Following gene: 220932665
Centisome position: 75.94
GC content: 40.61
Gene sequence:
>522_bases ATGAATCAGAATAATGTAAAATTTATTACAAGGACTGCCATTTTACTGGCGATTGCTCTGGTATTTCAGATGGGTGGTTT CCCCCAGATGATTACCGGGCCTGTTGTTAATACTGTTCTTTATGTAGCCGCCATGCTGGTGGGTATATCAGGAGGGGTTA TTATCGGGATTTTTACTCCTGTAATTGCTTTTATAAGAGGTATTTTACCGGGAGTATTAGCCCCGATGATTCCTTTTATT GCAGCCGGTAATGCTGTACTGGTTATTATCTTTGCTCTTCTTAAGAAAAAGAATAAAATACTGGCAGTAGTAGCAGCTTC AGCTGTTAAATTTTTGCTACTGGCCGGGGCTGTTCAGTTATTGTTGAAAGTCCTATCAATTAAAATACCCGGTAAAGTAG CCCAGGCTATGAGTTTTCCCCAGTTAGTTACTGCCCTGATAGGAGGTATTATAGCTCTCCTGGTTTATAAGGGTCTTGAG GCCACAAATCTTGACCTCGGCCAGGAAAACAAATTAAATTGA
Upstream 100 bases:
>100_bases TGGTCTGACTGGACTATGTCAGTGATGTTGAAGTCTTAAAGGTTTCTTAACTTATATGGTATTTACAATTATTATAATAT TTCAAGGAGGGAATTTGAAA
Downstream 100 bases:
>100_bases TAAAATTACTCAAAAAAATAATTAAAGTGTGAGAAATATCATGGTTTACCTCCTCCCCCGGCGATATAATTGGAAGTGAA CAGAAATGATAATTTAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNQNNVKFITRTAILLAIALVFQMGGFPQMITGPVVNTVLYVAAMLVGISGGVIIGIFTPVIAFIRGILPGVLAPMIPFI AAGNAVLVIIFALLKKKNKILAVVAASAVKFLLLAGAVQLLLKVLSIKIPGKVAQAMSFPQLVTALIGGIIALLVYKGLE ATNLDLGQENKLN
Sequences:
>Translated_173_residues MNQNNVKFITRTAILLAIALVFQMGGFPQMITGPVVNTVLYVAAMLVGISGGVIIGIFTPVIAFIRGILPGVLAPMIPFI AAGNAVLVIIFALLKKKNKILAVVAASAVKFLLLAGAVQLLLKVLSIKIPGKVAQAMSFPQLVTALIGGIIALLVYKGLE ATNLDLGQENKLN >Mature_173_residues MNQNNVKFITRTAILLAIALVFQMGGFPQMITGPVVNTVLYVAAMLVGISGGVIIGIFTPVIAFIRGILPGVLAPMIPFI AAGNAVLVIIFALLKKKNKILAVVAASAVKFLLLAGAVQLLLKVLSIKIPGKVAQAMSFPQLVTALIGGIIALLVYKGLE ATNLDLGQENKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18087; Mature: 18087
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNNVKFITRTAILLAIALVFQMGGFPQMITGPVVNTVLYVAAMLVGISGGVIIGIFTP CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VIAFIRGILPGVLAPMIPFIAAGNAVLVIIFALLKKKNKILAVVAASAVKFLLLAGAVQL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLKVLSIKIPGKVAQAMSFPQLVTALIGGIIALLVYKGLEATNLDLGQENKLN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQNNVKFITRTAILLAIALVFQMGGFPQMITGPVVNTVLYVAAMLVGISGGVIIGIFTP CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VIAFIRGILPGVLAPMIPFIAAGNAVLVIIFALLKKKNKILAVVAASAVKFLLLAGAVQL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLKVLSIKIPGKVAQAMSFPQLVTALIGGIIALLVYKGLEATNLDLGQENKLN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA