| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932644
Identifier: 220932644
GI number: 220932644
Start: 1931187
End: 1931615
Strand: Reverse
Name: 220932644
Synonym: Hore_18080
Alternate gene names: NA
Gene position: 1931615-1931187 (Counterclockwise)
Preceding gene: 220932645
Following gene: 220932643
Centisome position: 74.92
GC content: 38.69
Gene sequence:
>429_bases ATGGGCCACCCTGTCAATATTAGAATTAAAAACAAACATACTCTGGTAGATGGTTTTCAGGATAAAATAGAATATGAAGG CCAGGGAAATTTTTATTTGAAGGATGATAGCTACTACCTGGTCTACCGGGACTATTCCGAAGGCCTGGATGGGGCCAGAA CTACAGTTAAAATCAAAAAATCAAAGGATAGAGTTTTAATTAAAAGGGGTAGACCGGCTCCAGCAAAGCAGGTCTTTATG AGTGGACAAACCCTGGAAGGTTGGCTGAGGATTGATAACAGGCAGGTAGCAATTAAGACAAAAACAGAGGAAATTAACTG TAGTCTAAACAAGAGTGGGGGAGAACTCCATATAGAATATGAACTCTTTATAGGTGGCAGGTATTCTGGAAAATACAGCC TTTCTATTTTTTTAGAAATAAGTGAGTAA
Upstream 100 bases:
>100_bases TTGTAAATACATAACGGATAGTATATAATATAGGAGGCGCCACAGTAGGCTTTGCCCGTTACTGTGGCTTTTTATTTTTG GCAGAAAAAGGAGGCTTTAA
Downstream 100 bases:
>100_bases AAAATTATAATAAAGTCCTGGAACTTAACTATTAAGACTCTGGGAAATAAATGACATAAGGATAACTGTTATCACAGGAG TAATTTTGTTGTATAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGHPVNIRIKNKHTLVDGFQDKIEYEGQGNFYLKDDSYYLVYRDYSEGLDGARTTVKIKKSKDRVLIKRGRPAPAKQVFM SGQTLEGWLRIDNRQVAIKTKTEEINCSLNKSGGELHIEYELFIGGRYSGKYSLSIFLEISE
Sequences:
>Translated_142_residues MGHPVNIRIKNKHTLVDGFQDKIEYEGQGNFYLKDDSYYLVYRDYSEGLDGARTTVKIKKSKDRVLIKRGRPAPAKQVFM SGQTLEGWLRIDNRQVAIKTKTEEINCSLNKSGGELHIEYELFIGGRYSGKYSLSIFLEISE >Mature_141_residues GHPVNIRIKNKHTLVDGFQDKIEYEGQGNFYLKDDSYYLVYRDYSEGLDGARTTVKIKKSKDRVLIKRGRPAPAKQVFMS GQTLEGWLRIDNRQVAIKTKTEEINCSLNKSGGELHIEYELFIGGRYSGKYSLSIFLEISE
Specific function: Unknown
COG id: COG4506
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16314; Mature: 16183
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHPVNIRIKNKHTLVDGFQDKIEYEGQGNFYLKDDSYYLVYRDYSEGLDGARTTVKIKK CCCCEEEEECCCEEEECCCCCEEEECCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEC SKDRVLIKRGRPAPAKQVFMSGQTLEGWLRIDNRQVAIKTKTEEINCSLNKSGGELHIEY CCCEEEEECCCCCCHHHEEECCCEEEEEEEECCEEEEEEEECCEEEEEEECCCCEEEEEE ELFIGGRYSGKYSLSIFLEISE EEEECCEECCEEEEEEEEEECC >Mature Secondary Structure GHPVNIRIKNKHTLVDGFQDKIEYEGQGNFYLKDDSYYLVYRDYSEGLDGARTTVKIKK CCCEEEEECCCEEEECCCCCEEEECCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEC SKDRVLIKRGRPAPAKQVFMSGQTLEGWLRIDNRQVAIKTKTEEINCSLNKSGGELHIEY CCCEEEEECCCCCCHHHEEECCCEEEEEEEECCEEEEEEEECCEEEEEEECCCCEEEEEE ELFIGGRYSGKYSLSIFLEISE EEEECCEECCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA