| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932640
Identifier: 220932640
GI number: 220932640
Start: 1927865
End: 1928461
Strand: Reverse
Name: 220932640
Synonym: Hore_18040
Alternate gene names: NA
Gene position: 1928461-1927865 (Counterclockwise)
Preceding gene: 220932641
Following gene: 220932639
Centisome position: 74.8
GC content: 37.02
Gene sequence:
>597_bases ATGGTAATAACAGACCCGGGAGGGGGATTACTTATGAATGCTCAACATTTTAGAAAAAAAACACCCCTGTCTTTAAGGAC TGACAACATTTATTTTTTTATGGGGTTATTAGCAGTATTCTGTGTACTGTTTTGTTTATCAGCCAGTGTTTATGCCTCTA ATATAATTGAGGGTTACATAAAAGAGGTTAATCTCCAGAATAATACCATCCAGATTAATTCAGAAACTTACCAGATTAAG GATGAGGTTAATATTTACTATAATGGACACAAATCATCCCTGACAGCATGCCTGCCTCCGGGGCAGGAGCGGTATCAGTG GGGGGTATTGACCCTTGATGATAAAGGTCTTCCTGGAGAATTAAGGGTCTACTATAATGTAATTGAAGGTTTTGTTACGG AAGTTGATTATGAAAATAAAAAATTATACCTGAAGAAGTTTAACCAGGATAGATCTGATATTGATATGCCAGAGTTCTTC AACTGGAGAGAGGGTATAACCTCTGGAATAGGCAAGTTAAAGATTTTAAAACCAGGGGATTATATAGTTTTGATTGTTGG CCGGGGGCTGATACTTGAAATCCATAAGGACTTATAA
Upstream 100 bases:
>100_bases TCGAGTATCTGAAGTTAAATAGTTAACTATAGAAGCCAAAGAGTTAACTATAAAAATTAATACTTGTTTTCAGGTATAAA ACCCCCTTACCCGGGTAATA
Downstream 100 bases:
>100_bases GGATAATAAAATATTTAATTATAAGAAGGATTTTTCAAAAATATGGAGAATAGTAAGGGTGAGGAGGTGAAAACCTGGTT AGTAACTAATCAGGTTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MVITDPGGGLLMNAQHFRKKTPLSLRTDNIYFFMGLLAVFCVLFCLSASVYASNIIEGYIKEVNLQNNTIQINSETYQIK DEVNIYYNGHKSSLTACLPPGQERYQWGVLTLDDKGLPGELRVYYNVIEGFVTEVDYENKKLYLKKFNQDRSDIDMPEFF NWREGITSGIGKLKILKPGDYIVLIVGRGLILEIHKDL
Sequences:
>Translated_198_residues MVITDPGGGLLMNAQHFRKKTPLSLRTDNIYFFMGLLAVFCVLFCLSASVYASNIIEGYIKEVNLQNNTIQINSETYQIK DEVNIYYNGHKSSLTACLPPGQERYQWGVLTLDDKGLPGELRVYYNVIEGFVTEVDYENKKLYLKKFNQDRSDIDMPEFF NWREGITSGIGKLKILKPGDYIVLIVGRGLILEIHKDL >Mature_198_residues MVITDPGGGLLMNAQHFRKKTPLSLRTDNIYFFMGLLAVFCVLFCLSASVYASNIIEGYIKEVNLQNNTIQINSETYQIK DEVNIYYNGHKSSLTACLPPGQERYQWGVLTLDDKGLPGELRVYYNVIEGFVTEVDYENKKLYLKKFNQDRSDIDMPEFF NWREGITSGIGKLKILKPGDYIVLIVGRGLILEIHKDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22629; Mature: 22629
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVITDPGGGLLMNAQHFRKKTPLSLRTDNIYFFMGLLAVFCVLFCLSASVYASNIIEGYI CEEECCCCCEEECHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVNLQNNTIQINSETYQIKDEVNIYYNGHKSSLTACLPPGQERYQWGVLTLDDKGLPGE HHCCCCCCEEEECCCEEEEEEEEEEEECCCCCCEEEECCCCCHHEEEEEEEECCCCCCCH LRVYYNVIEGFVTEVDYENKKLYLKKFNQDRSDIDMPEFFNWREGITSGIGKLKILKPGD HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCHHHHHHCCCCEEEEECCCC YIVLIVGRGLILEIHKDL EEEEEECCCEEEEEECCC >Mature Secondary Structure MVITDPGGGLLMNAQHFRKKTPLSLRTDNIYFFMGLLAVFCVLFCLSASVYASNIIEGYI CEEECCCCCEEECHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVNLQNNTIQINSETYQIKDEVNIYYNGHKSSLTACLPPGQERYQWGVLTLDDKGLPGE HHCCCCCCEEEECCCEEEEEEEEEEEECCCCCCEEEECCCCCHHEEEEEEEECCCCCCCH LRVYYNVIEGFVTEVDYENKKLYLKKFNQDRSDIDMPEFFNWREGITSGIGKLKILKPGD HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCHHHHHHCCCCEEEEECCCC YIVLIVGRGLILEIHKDL EEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA