| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932614
Identifier: 220932614
GI number: 220932614
Start: 1906242
End: 1906790
Strand: Reverse
Name: 220932614
Synonym: Hore_17780
Alternate gene names: NA
Gene position: 1906790-1906242 (Counterclockwise)
Preceding gene: 220932615
Following gene: 220932613
Centisome position: 73.96
GC content: 43.35
Gene sequence:
>549_bases GTGGGAGATAAGAGTAAACTTGAGGAAAAGGTGATGGAGGGAATTCTGGGACCCAGGGAATTAAAAAAGGAAGAAAAAAA TCGCTTCCTGGGTGAATATAAAGAAAGGGTCATAAAATACCTTACTATAGACCAGGTAGAGGAACCGGCTATCTATCCGG AAATTATAAAAGCAGTCAAACACCCTGATGCAGACAGGATGGTGGTCAGGCGTAGTGTGGGACTTGAGTCTGCCCGAAAA TATATTGATATGGCCCGGGAGCAGGGTCTTTTATTTAAAAGGGTTGATTCCCCTGAATTAAAAGGGGATGTGGCCCTGGT GGTGGCCAGTGATGGCGCCGTCGAAGTAAAAAACAGGAAGGTATTGGATAGGGAAAAAAGGTTGAAACAAAAAGGTGTTT CTGGTAAAATTATTAAGAATGTGGGGGCCAGGTTATGTCCAGAATGCTGGTCTGAATTGGAGGAAAAGGCCCCTGAAGAA CTTATTAACTATGATAAGTATGGATTGTTAGACAGGCTGTTGGGAACAGAGTGTGTGTGTCATAAGTAG
Upstream 100 bases:
>100_bases TTAAATTTACAGAGACCCAATTACAGAGCCCCTTAATAACTTAATAGAGAACCTGAATTAAGTAACTTTGACTAAATTTT CTGGTAAAGGGTGTTTGAAA
Downstream 100 bases:
>100_bases TTTTCATTAAATTAGTTTAAAAATTTAGTACCAAATTCCTGAAGGATTAAATAAGGGCTTTCACGAATTATGTATAAGTG CATATAATATAGATGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGDKSKLEEKVMEGILGPRELKKEEKNRFLGEYKERVIKYLTIDQVEEPAIYPEIIKAVKHPDADRMVVRRSVGLESARK YIDMAREQGLLFKRVDSPELKGDVALVVASDGAVEVKNRKVLDREKRLKQKGVSGKIIKNVGARLCPECWSELEEKAPEE LINYDKYGLLDRLLGTECVCHK
Sequences:
>Translated_182_residues MGDKSKLEEKVMEGILGPRELKKEEKNRFLGEYKERVIKYLTIDQVEEPAIYPEIIKAVKHPDADRMVVRRSVGLESARK YIDMAREQGLLFKRVDSPELKGDVALVVASDGAVEVKNRKVLDREKRLKQKGVSGKIIKNVGARLCPECWSELEEKAPEE LINYDKYGLLDRLLGTECVCHK >Mature_181_residues GDKSKLEEKVMEGILGPRELKKEEKNRFLGEYKERVIKYLTIDQVEEPAIYPEIIKAVKHPDADRMVVRRSVGLESARKY IDMAREQGLLFKRVDSPELKGDVALVVASDGAVEVKNRKVLDREKRLKQKGVSGKIIKNVGARLCPECWSELEEKAPEEL INYDKYGLLDRLLGTECVCHK
Specific function: Unknown
COG id: COG5506
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20812; Mature: 20680
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDKSKLEEKVMEGILGPRELKKEEKNRFLGEYKERVIKYLTIDQVEEPAIYPEIIKAVK CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC HPDADRMVVRRSVGLESARKYIDMAREQGLLFKRVDSPELKGDVALVVASDGAVEVKNRK CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCEEECCHH VLDREKRLKQKGVSGKIIKNVGARLCPECWSELEEKAPEELINYDKYGLLDRLLGTECVC HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHCCHHHC HK CC >Mature Secondary Structure GDKSKLEEKVMEGILGPRELKKEEKNRFLGEYKERVIKYLTIDQVEEPAIYPEIIKAVK CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC HPDADRMVVRRSVGLESARKYIDMAREQGLLFKRVDSPELKGDVALVVASDGAVEVKNRK CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCEEECCHH VLDREKRLKQKGVSGKIIKNVGARLCPECWSELEEKAPEELINYDKYGLLDRLLGTECVC HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHCCHHHC HK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA