| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932603
Identifier: 220932603
GI number: 220932603
Start: 1891420
End: 1891959
Strand: Reverse
Name: 220932603
Synonym: Hore_17670
Alternate gene names: NA
Gene position: 1891959-1891420 (Counterclockwise)
Preceding gene: 220932604
Following gene: 220932602
Centisome position: 73.38
GC content: 37.41
Gene sequence:
>540_bases ATGAATATCAAAAATAAACTGGTTAAAAATAAACTGGGATACCCAACCATAATACTGATAACTGTACTGGTTATTACATT TTTGTTTAATCCAATTTCCATTTTGAAAGCCGGTGATGAAGCAGAGGGTAAGATAGCCTATGTAGATGTTCAGGCAGTCT TCAATGAACATCCGGAAAAAGTTAAAGCGGAAAAAGAGCTTAACCAGCTGGCCCAGTCCATGCAGGCTGAGCTTGAGGAA AAGGCTAAAAACCTGCCGGAATCAGAACAGCAGGAACTGGTAAATGAATACCAGATGAAATTGACAAGACAGGAACAGGA AATGATCCATGGCTTGCTGGTTAAAATTGATAAGGCTATAAAAATAGTTGCCGAACAGAAAAAGGTCAGGCTCGTCCTTG ATAAAAAGAATGTTATTTACGGTGGTTATGATTTAACCCAGGATGTTATAGATTATATTAAAGAAAATTATGAGGAAACA GAAAAAGGGGTAGTGGACACTGATGTTAGTTTAGATGATAAGGGCAATTCCCGGAATTAA
Upstream 100 bases:
>100_bases TGGATTACGGTTTTGATGAAGACTGGAATGGTAAGTTCCACTTCAGTCTGGGGCCAACCTTTTAGATAAAATTAAGCTAA CTTAAGGAGGATAAATAGTT
Downstream 100 bases:
>100_bases GATAGTATTTATAATTAATTTTTCTTATCTCAAAAACGGGTAACAACTTTCATTAAACTTAATTAATAATTATAATAGAA AGGGGGCAGGGGATGTGATG
Product: outer membrane chaperone Skp
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNIKNKLVKNKLGYPTIILITVLVITFLFNPISILKAGDEAEGKIAYVDVQAVFNEHPEKVKAEKELNQLAQSMQAELEE KAKNLPESEQQELVNEYQMKLTRQEQEMIHGLLVKIDKAIKIVAEQKKVRLVLDKKNVIYGGYDLTQDVIDYIKENYEET EKGVVDTDVSLDDKGNSRN
Sequences:
>Translated_179_residues MNIKNKLVKNKLGYPTIILITVLVITFLFNPISILKAGDEAEGKIAYVDVQAVFNEHPEKVKAEKELNQLAQSMQAELEE KAKNLPESEQQELVNEYQMKLTRQEQEMIHGLLVKIDKAIKIVAEQKKVRLVLDKKNVIYGGYDLTQDVIDYIKENYEET EKGVVDTDVSLDDKGNSRN >Mature_179_residues MNIKNKLVKNKLGYPTIILITVLVITFLFNPISILKAGDEAEGKIAYVDVQAVFNEHPEKVKAEKELNQLAQSMQAELEE KAKNLPESEQQELVNEYQMKLTRQEQEMIHGLLVKIDKAIKIVAEQKKVRLVLDKKNVIYGGYDLTQDVIDYIKENYEET EKGVVDTDVSLDDKGNSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20435; Mature: 20435
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKNKLVKNKLGYPTIILITVLVITFLFNPISILKAGDEAEGKIAYVDVQAVFNEHPEK CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEHHHHHCCCHHH VKAEKELNQLAQSMQAELEEKAKNLPESEQQELVNEYQMKLTRQEQEMIHGLLVKIDKAI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVAEQKKVRLVLDKKNVIYGGYDLTQDVIDYIKENYEETEKGVVDTDVSLDDKGNSRN HHHHHHHHHEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNIKNKLVKNKLGYPTIILITVLVITFLFNPISILKAGDEAEGKIAYVDVQAVFNEHPEK CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEHHHHHCCCHHH VKAEKELNQLAQSMQAELEEKAKNLPESEQQELVNEYQMKLTRQEQEMIHGLLVKIDKAI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVAEQKKVRLVLDKKNVIYGGYDLTQDVIDYIKENYEETEKGVVDTDVSLDDKGNSRN HHHHHHHHHEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA