Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932599

Identifier: 220932599

GI number: 220932599

Start: 1888240

End: 1888878

Strand: Reverse

Name: 220932599

Synonym: Hore_17630

Alternate gene names: NA

Gene position: 1888878-1888240 (Counterclockwise)

Preceding gene: 220932600

Following gene: 220932597

Centisome position: 73.26

GC content: 43.19

Gene sequence:

>639_bases
ATGAAGAAGATTACCCTGTTTATGTTTCTGTTTCTATTCCTTGTGGCTGTAAATGGTGTATCAGAGGCAGTAGTTAAGGG
AGAGCTGGTTAATATACCAACAGCTGATTTTATAGCAGACAGGGGATTGGTTAGTGTTGAGGCTGATTCCAGTGCCAACA
GGGTGGTAAAAGGACTGTTTGCAATTCATCCCCGGTTAATTGTCGGTGGCATGGTTGAGTTTAACAGGTGGAATGAGAGC
GAACTCGGGGTAGTGGTCAAAACTGTATTAGTTGATGAAGATAATAACCAACCTGCGGTGGCTGCCGGGATATATGGTCG
GGATATATTTGTTGTAGCCAGTAAAAATCTCGGCCTCGGTTTCGGTCTCAGGGGCCATCTGGGTCTCGGTAATGGTGAGC
TAGAAGGGCTTTATTTAGGTGTTAGTAAGGTGATCAATCCGGTTACCATTGAAGTAAGTGGTGAAAACAATACTTCTACC
TTGCCTCCCTTAATGATAATGGGGGAATATGTTAACCGGAATATTAACGTGGGTTTAAGGTTACCCCTGAAGGAAGATTT
ATTGCTGGACCTTAGTGCCATTAATATAGGTTCCCTTGATTCCGGAAGCTTAAGGGCAGGATTATCATATAGTTTTTAG

Upstream 100 bases:

>100_bases
AATTGAAGGAACAGGCTGCAAAAAGAAGACTACCGGAATTGCTTAAAAAAGTTAAGGAGCTGGAAAAAAGAATACAGGAA
CTTGAAAGGAGCTAGCTGAA

Downstream 100 bases:

>100_bases
GGCTGAAGATTATCAGGTTTATACATAAAAACCCCGGTTAAACCGGGGTTTTTTAATATCCTGCAAAAATTTTCAGGACC
TTATATTCAGGTCAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKITLFMFLFLFLVAVNGVSEAVVKGELVNIPTADFIADRGLVSVEADSSANRVVKGLFAIHPRLIVGGMVEFNRWNES
ELGVVVKTVLVDEDNNQPAVAAGIYGRDIFVVASKNLGLGFGLRGHLGLGNGELEGLYLGVSKVINPVTIEVSGENNTST
LPPLMIMGEYVNRNINVGLRLPLKEDLLLDLSAINIGSLDSGSLRAGLSYSF

Sequences:

>Translated_212_residues
MKKITLFMFLFLFLVAVNGVSEAVVKGELVNIPTADFIADRGLVSVEADSSANRVVKGLFAIHPRLIVGGMVEFNRWNES
ELGVVVKTVLVDEDNNQPAVAAGIYGRDIFVVASKNLGLGFGLRGHLGLGNGELEGLYLGVSKVINPVTIEVSGENNTST
LPPLMIMGEYVNRNINVGLRLPLKEDLLLDLSAINIGSLDSGSLRAGLSYSF
>Mature_212_residues
MKKITLFMFLFLFLVAVNGVSEAVVKGELVNIPTADFIADRGLVSVEADSSANRVVKGLFAIHPRLIVGGMVEFNRWNES
ELGVVVKTVLVDEDNNQPAVAAGIYGRDIFVVASKNLGLGFGLRGHLGLGNGELEGLYLGVSKVINPVTIEVSGENNTST
LPPLMIMGEYVNRNINVGLRLPLKEDLLLDLSAINIGSLDSGSLRAGLSYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22688; Mature: 22688

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITLFMFLFLFLVAVNGVSEAVVKGELVNIPTADFIADRGLVSVEADSSANRVVKGLF
CCCHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCHHHHHCCCEEEEECCCCHHHHHHHHH
AIHPRLIVGGMVEFNRWNESELGVVVKTVLVDEDNNQPAVAAGIYGRDIFVVASKNLGLG
HHCCCEEECCEEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCEE
FGLRGHLGLGNGELEGLYLGVSKVINPVTIEVSGENNTSTLPPLMIMGEYVNRNINVGLR
CCCEECEECCCCCCEEEEEEHHHHCCEEEEEEECCCCCCCCCHHHEEEHHHCCCCCEEEE
LPLKEDLLLDLSAINIGSLDSGSLRAGLSYSF
CCCCCCEEEEEEEECCCCCCCCCEECCCEECC
>Mature Secondary Structure
MKKITLFMFLFLFLVAVNGVSEAVVKGELVNIPTADFIADRGLVSVEADSSANRVVKGLF
CCCHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCHHHHHCCCEEEEECCCCHHHHHHHHH
AIHPRLIVGGMVEFNRWNESELGVVVKTVLVDEDNNQPAVAAGIYGRDIFVVASKNLGLG
HHCCCEEECCEEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCEE
FGLRGHLGLGNGELEGLYLGVSKVINPVTIEVSGENNTSTLPPLMIMGEYVNRNINVGLR
CCCEECEECCCCCCEEEEEEHHHHCCEEEEEEECCCCCCCCCHHHEEEHHHCCCCCEEEE
LPLKEDLLLDLSAINIGSLDSGSLRAGLSYSF
CCCCCCEEEEEEEECCCCCCCCCEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA