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The map label for this gene is fliD [H]

Identifier: 220932542

GI number: 220932542

Start: 1824578

End: 1825924

Strand: Reverse

Name: fliD [H]

Synonym: Hore_17060

Alternate gene names: 220932542

Gene position: 1825924-1824578 (Counterclockwise)

Preceding gene: 220932543

Following gene: 220932541

Centisome position: 70.82

GC content: 36.82

Gene sequence:

>1347_bases
ATGAGTTTCAGTATAGGTGGTTTAGGTACAGGGCTGGACACCAATCAAATCATTGATCAGATGATGCAAATTGAAAGGCG
CCCCATTTATTTACTGCAGCAACAGCAGGAAGAAATTCAATCAGATTTATCAGCATGGGGTTCTGTAGAAAGTAAATTGA
ATTCATTTAAATCAAAAGTCGATGATATTGAGTCTATCTTTGGGAAAATGGCTGTTACTGTAAATGATACTGAAGTAGTA
GATGTTACAGTTGATTCTTCTGCTTCTCTCGGTACATACAATATAGAAATTACCCAGCTGGCACAGTCTCATGCGGTAGC
TTCTGATGCCCAGGATGATAGTACATCAAACTTAAATTTGAGTGGTACTTTTTCTATTAACGGTACTGATATAACTGTTA
ATACTGATGATTCATTAGAAGATATAAAGAATCTAATCAACCAAACAAGTGATACAGGTGTTACGGCCAATATTATAGAT
AATACGTTAGTATTAAAGAGTAATGAAACAGGGACAACTAATAGTATTAGTATAAGTGATGTATCAGATTCTGTCGCTCA
ACAACTGGGATTAATTTCTGATGCAGCCGGTACGATAAAGAACGAACTTCAGACTGCCCAGGATGCTATTTTCAGCCTTG
ATGGCCTTTCAATTACCCGTAGTTCAAATGAAATAAATGACGTGATTCAAGGGGTTACCATTTCATTAAAAAAGGGAGGC
GGAGCAAGCACTCAGTTTACAGTTAATAAAGATATTGGCGGAATGATTGAAGAAATTAAAGCATTAATTGGTAGCTATAA
CAGTGCTGCAGGTACCATTTCTTCCATGACTGAAAAAGATGGCGAACTACAGGGTGATGTAACTCTTAATCAAATTGCAT
TCAAACTGCGCAGAAATTTGACAGATCCCTTTTTCGCTGATAACAGTGCAATTAACCAGCTTTCATTAATTGGTATAGAA
TCTGATAGATATGGTAATATTTCTGTAAATGAGACTGAATTAAGTGATGCACTGGAAAACAGCTTTGAAGATGTTAAAGC
ATTATTTACAGCTACAAGCAGTACAGAAGGATACAGTGGTTTACAGGAACGCATGAGTAACTATCTTTCAAGTATACTGG
ATTCTAATGGTTTTGTTGATGGAACCAAGGAGATGTTGCAAGAGCAGATTGACGATATTAACGAGGAAATTCAGGATCTG
GAGTACAGTATGACATTACGAGAACAAAAATTACGGCAGGATTTTATTGCCATGGAGAATGCAGTAGCTTCTATGAATAA
TCAGCTTTCCTGGTTACAGGGACAGTTTTCTAACATGAGCTCTGGACTAAGTTCACTGGGCATATAA

Upstream 100 bases:

>100_bases
AAAGAAATTCCCCCGGAAGAATTGTTGGATATAATAGCAAAAATAAAGAAAATGGTTGGAATGGTAATTAATGAATTAGT
TTAGTCAGGGGGTGTAATAA

Downstream 100 bases:

>100_bases
GATCGATTTTCTATAAGATGGGTGTTTATACCTAGGTATTTTTTGCCTGGGTATTCTTTTTAATAAAATTAAATTATTAA
GAATTGATGAAAAGGATGGT

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKVDDIESIFGKMAVTVNDTEVV
DVTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLNLSGTFSINGTDITVNTDDSLEDIKNLINQTSDTGVTANIID
NTLVLKSNETGTTNSISISDVSDSVAQQLGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNEINDVIQGVTISLKKGG
GASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTEKDGELQGDVTLNQIAFKLRRNLTDPFFADNSAINQLSLIGIE
SDRYGNISVNETELSDALENSFEDVKALFTATSSTEGYSGLQERMSNYLSSILDSNGFVDGTKEMLQEQIDDINEEIQDL
EYSMTLREQKLRQDFIAMENAVASMNNQLSWLQGQFSNMSSGLSSLGI

Sequences:

>Translated_448_residues
MSFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKVDDIESIFGKMAVTVNDTEVV
DVTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLNLSGTFSINGTDITVNTDDSLEDIKNLINQTSDTGVTANIID
NTLVLKSNETGTTNSISISDVSDSVAQQLGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNEINDVIQGVTISLKKGG
GASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTEKDGELQGDVTLNQIAFKLRRNLTDPFFADNSAINQLSLIGIE
SDRYGNISVNETELSDALENSFEDVKALFTATSSTEGYSGLQERMSNYLSSILDSNGFVDGTKEMLQEQIDDINEEIQDL
EYSMTLREQKLRQDFIAMENAVASMNNQLSWLQGQFSNMSSGLSSLGI
>Mature_447_residues
SFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKVDDIESIFGKMAVTVNDTEVVD
VTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLNLSGTFSINGTDITVNTDDSLEDIKNLINQTSDTGVTANIIDN
TLVLKSNETGTTNSISISDVSDSVAQQLGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNEINDVIQGVTISLKKGGG
ASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTEKDGELQGDVTLNQIAFKLRRNLTDPFFADNSAINQLSLIGIES
DRYGNISVNETELSDALENSFEDVKALFTATSSTEGYSGLQERMSNYLSSILDSNGFVDGTKEMLQEQIDDINEEIQDLE
YSMTLREQKLRQDFIAMENAVASMNNQLSWLQGQFSNMSSGLSSLGI

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=470, Percent_Identity=24.468085106383, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48348; Mature: 48217

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKV
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDIESIFGKMAVTVNDTEVVDVTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLNL
HHHHHHHHCEEEEECCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEE
SGTFSINGTDITVNTDDSLEDIKNLINQTSDTGVTANIIDNTLVLKSNETGTTNSISISD
EEEEEECCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCCCEEEECH
VSDSVAQQLGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNEINDVIQGVTISLKKGG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCEEEEECCC
GASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTEKDGELQGDVTLNQIAFKLRRNL
CCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
TDPFFADNSAINQLSLIGIESDRYGNISVNETELSDALENSFEDVKALFTATSSTEGYSG
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LQERMSNYLSSILDSNGFVDGTKEMLQEQIDDINEEIQDLEYSMTLREQKLRQDFIAMEN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVASMNNQLSWLQGQFSNMSSGLSSLGI
HHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKV
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDIESIFGKMAVTVNDTEVVDVTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLNL
HHHHHHHHCEEEEECCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEE
SGTFSINGTDITVNTDDSLEDIKNLINQTSDTGVTANIIDNTLVLKSNETGTTNSISISD
EEEEEECCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCCCEEEECH
VSDSVAQQLGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNEINDVIQGVTISLKKGG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCEEEEECCC
GASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTEKDGELQGDVTLNQIAFKLRRNL
CCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
TDPFFADNSAINQLSLIGIESDRYGNISVNETELSDALENSFEDVKALFTATSSTEGYSG
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LQERMSNYLSSILDSNGFVDGTKEMLQEQIDDINEEIQDLEYSMTLREQKLRQDFIAMEN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVASMNNQLSWLQGQFSNMSSGLSSLGI
HHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]