Click here to switch to the map view.

The map label for this gene is flgB [H]

Identifier: 220932528

GI number: 220932528

Start: 1811650

End: 1812045

Strand: Reverse

Name: flgB [H]

Synonym: Hore_16920

Alternate gene names: 220932528

Gene position: 1812045-1811650 (Counterclockwise)

Preceding gene: 220932529

Following gene: 220932527

Centisome position: 70.28

GC content: 36.62

Gene sequence:

>396_bases
ATGGATTTTACCCTGGATTTTTTAAAACTGGGGCTGGATGGAGCCAGTAAACGGCATAGGGCCCTGGCTGATAATATTGC
CAATGTTGATACCCCGAATTACAAGAGGAAAGATGTCGATTTTGTCTCTACATTGAAGTCAATTGCCAGTCAAAATGCAA
AACTTAAACTTGAAACCACTGATGATGGACACATTTCCGGAACAGGTTCTGTTTTAAAACCTTTTAAAGAATACAGGATA
ACTAACACCAGTTATCGTAATGATGGTAATAATGTTGATATTGAGGTTGAAATGGCTGAACTCGCCAAAAACAACTTATA
TTACAATACCCTGGTTCAACAAATTTCTCAGAAGTTTAAAATTCTTAATGAGACCATTGATAAGGGGAGTAGATAA

Upstream 100 bases:

>100_bases
TTAATATTTTAACAATTTATGTTATAATTAAATAGCTAATATATATATATGATATACATAAGTTTTGGATAAATATTCAA
GTTGAGAGTGGGGTGGAAAA

Downstream 100 bases:

>100_bases
TTATGCTTGATAGTCTGAATATCAGTGCTTCTGGCCTTACTGCCCAGAGGTTGAGGATGGATATAATAGCTGATAATATT
GCCAATGTCAACACCACCAG

Product: flagellar basal-body rod protein FlgB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MDFTLDFLKLGLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQNAKLKLETTDDGHISGTGSVLKPFKEYRI
TNTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQISQKFKILNETIDKGSR

Sequences:

>Translated_131_residues
MDFTLDFLKLGLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQNAKLKLETTDDGHISGTGSVLKPFKEYRI
TNTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQISQKFKILNETIDKGSR
>Mature_131_residues
MDFTLDFLKLGLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQNAKLKLETTDDGHISGTGSVLKPFKEYRI
TNTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQISQKFKILNETIDKGSR

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=135, Percent_Identity=31.8518518518519, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14775; Mature: 14775

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTLDFLKLGLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQNAKLKLETT
CCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC
DDGHISGTGSVLKPFKEYRITNTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQISQKFK
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHH
ILNETIDKGSR
HHHHHHCCCCC
>Mature Secondary Structure
MDFTLDFLKLGLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQNAKLKLETT
CCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC
DDGHISGTGSVLKPFKEYRITNTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQISQKFK
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHH
ILNETIDKGSR
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]