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The map label for this gene is flhF [H]

Identifier: 220932504

GI number: 220932504

Start: 1789799

End: 1790869

Strand: Reverse

Name: flhF [H]

Synonym: Hore_16670

Alternate gene names: 220932504

Gene position: 1790869-1789799 (Counterclockwise)

Preceding gene: 220932505

Following gene: 220932503

Centisome position: 69.46

GC content: 38.84

Gene sequence:

>1071_bases
ATGCGTGTTAAAAAATATGTAGGAGACACGATCCAGGATACTATCTTTAAGGTCAAAGCCGATTTAGGCCCTGATGCCAT
AATTTTAAATACCCGTAAATACAAACAGGGTGGGTTTATGGGGTTATTTTCCCGGACAAAGGTTGAAGTCCTGGCCGCCC
TTGAGGATAAAAAAACATCCCACCGGGATGAAAATTCGGAGAAGGCCTTGAAGGAGATTAATAACCTGAAGAAAATGGTT
CAGGCAATGAATGAAAAATGGGAATCTGATTCCTTTTTAAATAAACTACCTGATAATTTGTCTTCAATTTACAAATACCT
GGTCAATCAGAGGGTGGACAAAGGGTACTGTCAGGAGTTAATGAAAAAGCTTAAAAATGCCAGTGTAGATAGTCAGAAAT
CATTAATATCACTACTTGAGCGCAAACTGAACCAGGTTATAGGTAATCCTGAACCCATCAGGGTTAATAGAAATGAGCAA
AAGGTTGTATTATTTGCCGGACCGACCGGAGTGGGGAAAACGACCACTATAGCAAAGCTGGCCGCCCGGTTTGCCCTGGA
TAAGGAAGTTAAGGTGGGGTTAATAACAGCTGATACCTACCGTATTGCAGCCGTTCAGCAGTTACAGACCTATAGTGATA
TTATAAACATTCCTTTACATGTTGTTTACAATGAAAGGGAATTGAGCCAGATTATCCGGGACAAGCTGAAAAAATACCAG
CTAATCCTGGTAGATACGGCCGGTAGTAGCTGGAATGACCAGCTCCAGCTGGGGAGATTGAAGAAGTTTGCCAGCCGGAA
TTATGTTGATGAAATTCATTTATTGATAAGTATGAGTACCAAAAGTGAAGATATAAAAGGTATTTTAAAGAAGTTTTCTA
TAATTAAGCCTGATAAGCTTTTATTAACCAAACTTGATGAAACAACAACCTATGGTGATATAGTTAATATCAAAAGAGAG
TATAAATTACCCTATTCCTATATTACATATGGGCAGGATGTCCCTGATGATATTAAGCCAGCCCGGAAAGAGGAGTTAAT
ACAGTATATATTAGGTGATTTAAATGGTTGA

Upstream 100 bases:

>100_bases
TAAAGAATTAACATATAGAAGCTTTAAGGATTTGGTTGTTCTATCATATAATGAACTACAGCCAGATACTAAAATTGAGG
TTTTGGGGACGGTGACATAA

Downstream 100 bases:

>100_bases
TCAGGCAACAAGGCTGAGGAAATTAGTCAAAGCAAAAGAAATAAAGGGTTCTGAAACCAGAGTCATAGCAATTGCCAGTG
GCAAAGGGGGAGTCGGGAAA

Product: GTP-binding signal recognition particle SRP54 G- domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRVKKYVGDTIQDTIFKVKADLGPDAIILNTRKYKQGGFMGLFSRTKVEVLAALEDKKTSHRDENSEKALKEINNLKKMV
QAMNEKWESDSFLNKLPDNLSSIYKYLVNQRVDKGYCQELMKKLKNASVDSQKSLISLLERKLNQVIGNPEPIRVNRNEQ
KVVLFAGPTGVGKTTTIAKLAARFALDKEVKVGLITADTYRIAAVQQLQTYSDIINIPLHVVYNERELSQIIRDKLKKYQ
LILVDTAGSSWNDQLQLGRLKKFASRNYVDEIHLLISMSTKSEDIKGILKKFSIIKPDKLLLTKLDETTTYGDIVNIKRE
YKLPYSYITYGQDVPDDIKPARKEELIQYILGDLNG

Sequences:

>Translated_356_residues
MRVKKYVGDTIQDTIFKVKADLGPDAIILNTRKYKQGGFMGLFSRTKVEVLAALEDKKTSHRDENSEKALKEINNLKKMV
QAMNEKWESDSFLNKLPDNLSSIYKYLVNQRVDKGYCQELMKKLKNASVDSQKSLISLLERKLNQVIGNPEPIRVNRNEQ
KVVLFAGPTGVGKTTTIAKLAARFALDKEVKVGLITADTYRIAAVQQLQTYSDIINIPLHVVYNERELSQIIRDKLKKYQ
LILVDTAGSSWNDQLQLGRLKKFASRNYVDEIHLLISMSTKSEDIKGILKKFSIIKPDKLLLTKLDETTTYGDIVNIKRE
YKLPYSYITYGQDVPDDIKPARKEELIQYILGDLNG
>Mature_356_residues
MRVKKYVGDTIQDTIFKVKADLGPDAIILNTRKYKQGGFMGLFSRTKVEVLAALEDKKTSHRDENSEKALKEINNLKKMV
QAMNEKWESDSFLNKLPDNLSSIYKYLVNQRVDKGYCQELMKKLKNASVDSQKSLISLLERKLNQVIGNPEPIRVNRNEQ
KVVLFAGPTGVGKTTTIAKLAARFALDKEVKVGLITADTYRIAAVQQLQTYSDIINIPLHVVYNERELSQIIRDKLKKYQ
LILVDTAGSSWNDQLQLGRLKKFASRNYVDEIHLLISMSTKSEDIKGILKKFSIIKPDKLLLTKLDETTTYGDIVNIKRE
YKLPYSYITYGQDVPDDIKPARKEELIQYILGDLNG

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=213, Percent_Identity=28.169014084507, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4507215, Length=213, Percent_Identity=28.169014084507, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1789874, Length=243, Percent_Identity=28.3950617283951, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788963, Length=263, Percent_Identity=25.4752851711027, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325345, Length=285, Percent_Identity=24.9122807017544, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17647949, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 40639; Mature: 40639

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKKYVGDTIQDTIFKVKADLGPDAIILNTRKYKQGGFMGLFSRTKVEVLAALEDKKTS
CCCHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHC
HRDENSEKALKEINNLKKMVQAMNEKWESDSFLNKLPDNLSSIYKYLVNQRVDKGYCQEL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH
MKKLKNASVDSQKSLISLLERKLNQVIGNPEPIRVNRNEQKVVLFAGPTGVGKTTTIAKL
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHH
AARFALDKEVKVGLITADTYRIAAVQQLQTYSDIINIPLHVVYNERELSQIIRDKLKKYQ
HHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHEE
LILVDTAGSSWNDQLQLGRLKKFASRNYVDEIHLLISMSTKSEDIKGILKKFSIIKPDKL
EEEEECCCCCCCHHHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHHHHHHCCCCCCHH
LLTKLDETTTYGDIVNIKREYKLPYSYITYGQDVPDDIKPARKEELIQYILGDLNG
HHEECCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVKKYVGDTIQDTIFKVKADLGPDAIILNTRKYKQGGFMGLFSRTKVEVLAALEDKKTS
CCCHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHC
HRDENSEKALKEINNLKKMVQAMNEKWESDSFLNKLPDNLSSIYKYLVNQRVDKGYCQEL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH
MKKLKNASVDSQKSLISLLERKLNQVIGNPEPIRVNRNEQKVVLFAGPTGVGKTTTIAKL
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHH
AARFALDKEVKVGLITADTYRIAAVQQLQTYSDIINIPLHVVYNERELSQIIRDKLKKYQ
HHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHEE
LILVDTAGSSWNDQLQLGRLKKFASRNYVDEIHLLISMSTKSEDIKGILKKFSIIKPDKL
EEEEECCCCCCCHHHHHHHHHHHHHCCHHHHEEEEEEECCCHHHHHHHHHHHCCCCCCHH
LLTKLDETTTYGDIVNIKREYKLPYSYITYGQDVPDDIKPARKEELIQYILGDLNG
HHEECCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447978; 9384377 [H]