| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932501
Identifier: 220932501
GI number: 220932501
Start: 1787916
End: 1788275
Strand: Reverse
Name: 220932501
Synonym: Hore_16640
Alternate gene names: NA
Gene position: 1788275-1787916 (Counterclockwise)
Preceding gene: 220932502
Following gene: 220932500
Centisome position: 69.36
GC content: 41.11
Gene sequence:
>360_bases ATGAGACTGAGGGCATTTACGGCTTTATTTGCCGGTACCCTGGCTTATATGAGTGTTATTGTTATCGGGGTAATACTGGG GATGGACTTATCATCTATTTTTACCTGGAGTCTGGGTGCTTTAGCCTTTTTTGCTGCAGGTGGCTGGTTGATAACCTATA CCCTGGAAACCTTATCCCGGAAACATGAATTTCAGATTAATAATGATTATAATAGCAGTAAGACCAGGGGGTCTCAACAG GAAACAGGAGAAGATAGTGAAACTAAACAATCTGAAAATAATAACAGTGATACAGGTGATAACAGTGAATTTACCCCGCT CGATCCTCCTATCCTGGAGGTAGATAATAGAGAGGAGTAA
Upstream 100 bases:
>100_bases GGTGTTAAGTTTACAGATATTGATCATCAATCCAGAGAGAAGATAATCAGCTGGTTATTTGAATACCAGAGGGAGCTCAG GCAGAAAGGATTGTTATAAG
Downstream 100 bases:
>100_bases TAAGGGGGATAAATTATGGCAGTTTCTCAGGAAAAAGTTGAGTATCTTGACTTGTGGGAGGCCTATAAGGGTAAAGGTAG CCAGGAGGCCAGAAAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MRLRAFTALFAGTLAYMSVIVIGVILGMDLSSIFTWSLGALAFFAAGGWLITYTLETLSRKHEFQINNDYNSSKTRGSQQ ETGEDSETKQSENNNSDTGDNSEFTPLDPPILEVDNREE
Sequences:
>Translated_119_residues MRLRAFTALFAGTLAYMSVIVIGVILGMDLSSIFTWSLGALAFFAAGGWLITYTLETLSRKHEFQINNDYNSSKTRGSQQ ETGEDSETKQSENNNSDTGDNSEFTPLDPPILEVDNREE >Mature_119_residues MRLRAFTALFAGTLAYMSVIVIGVILGMDLSSIFTWSLGALAFFAAGGWLITYTLETLSRKHEFQINNDYNSSKTRGSQQ ETGEDSETKQSENNNSDTGDNSEFTPLDPPILEVDNREE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13206; Mature: 13206
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRAFTALFAGTLAYMSVIVIGVILGMDLSSIFTWSLGALAFFAAGGWLITYTLETLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH KHEFQINNDYNSSKTRGSQQETGEDSETKQSENNNSDTGDNSEFTPLDPPILEVDNREE HCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MRLRAFTALFAGTLAYMSVIVIGVILGMDLSSIFTWSLGALAFFAAGGWLITYTLETLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH KHEFQINNDYNSSKTRGSQQETGEDSETKQSENNNSDTGDNSEFTPLDPPILEVDNREE HCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA