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The map label for this gene is rfaG [C]

Identifier: 220932435

GI number: 220932435

Start: 1714303

End: 1715562

Strand: Reverse

Name: rfaG [C]

Synonym: Hore_15990

Alternate gene names: 220932435

Gene position: 1715562-1714303 (Counterclockwise)

Preceding gene: 220932438

Following gene: 220932434

Centisome position: 66.54

GC content: 40.32

Gene sequence:

>1260_bases
GTGAAAGTTCTGATGCTTTCCTGGGAATACCCGCCGGTAAGTTTCGGTGGTTTAGCCCGTCATGTTCAGGATTTAAGTGA
AGCCCTTGTTGAGCAGGGACATCAGGTCTATGTTATAACCCAGGGTAGTAGTGACACCTCTGAAAAAGAAGAAATAAATG
GTGTTAGAGTCCTCAGGACAGCCCCGGTTCAGGTTAATGCCAACAATTTTGTCGACTATATTTTGCAGTTGAATTTTCAG
ATTCTGGAAAAGGCTTTTGGTCTTATGCCCGGGGGGATAGACATCATTCATGGCCATGACTGGCTAGTTTTCTGGAGTAG
TAAGGTTATGAAACATGCCCTTAAAAAACCGCTGGTATATACCATTCATGCTACTGAATATGGACGCAACCACGGTATTT
ACAATGACATGCAGAGGTATATTAATGATCTTGAGTGGTATTCATGTTTCGAGGCCTGGAGGGTTATAGTCTGTAGTGAT
TATATGAATCAGGAAGTTAAAAACCTCTTCCAGCTTCCTTCTGATAAGGTTATCAAGATTGAAAATGGGGTAGACCCGGA
AAAATATAAAGCCAGATGTACCCCCGAATTCAGACAAAAGTATGCTGACCCCAGTGAGGATATTGTTTTTTATGTTGGTA
GAATGGTCAGGGAAAAAGGAGTTCAGGTTTTAATCAGGTCTATACCTGAAATATTGAAGGAACGGCCGGAGACAAAATTT
ATTATTGCCGGGAAGGGTCCCAATCTGGAACATTTAAAATCTCTTGCTGCCCATATAGGGGTAAGTGACAGAATATATTT
TACCGGGTTTGTCAGTGATGAAGTCAGAAATAAACTTTATCAGGCAGCAGATATTGCTGTATTTCCAAGCCTTTATGAAC
CCTTTGGGATTGTGGCCCTTGAAGCTATGGCTACAAAAACACCTGTAGTTGTCAGTAATACCGGAGGCCTCAGTGAATTT
GTCACCCATAACCAGAATGGAGTTAAGGTTAATGTTAATGATCCACACCACCTGGCCAGAGAAGTAATAGACTTACTTAA
AGAAAAAAACAGGGCAAAGAAGCTTGCCAGAAATGGTTATAAGATGGTTGAGGAAGAATATAGTTGGAAGAAAATTGCCG
GTAAAACGGCCAGGGTTTACCGGAATGTCCTGTCAGAATATGAGAATAGTAACTGGAATAAGAATAAAGAAAGAACATAT
ATTAAGAATGAAGAAGATTCACCGGTTTACAGATATCTGTTTAAAAGAAAGTTCAGTTAA

Upstream 100 bases:

>100_bases
TATGCACTAACTGTCCTTTAATTATGCGCCGGGAATTGAATAAAATAGACCTCTTTGGAAATATTAAGAATCGTAATGTT
AATAATGGGAGGTAATTGAT

Downstream 100 bases:

>100_bases
TCCAGGTGTGAAAGGGGGATTACCTTTTGAAAGGTGTAATTATGGCCGGCGGGCAGGGTTCGAGGTTACGTCCGCTAACA
TGTAACCTACCCAAGCCCAT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKVLMLSWEYPPVSFGGLARHVQDLSEALVEQGHQVYVITQGSSDTSEKEEINGVRVLRTAPVQVNANNFVDYILQLNFQ
ILEKAFGLMPGGIDIIHGHDWLVFWSSKVMKHALKKPLVYTIHATEYGRNHGIYNDMQRYINDLEWYSCFEAWRVIVCSD
YMNQEVKNLFQLPSDKVIKIENGVDPEKYKARCTPEFRQKYADPSEDIVFYVGRMVREKGVQVLIRSIPEILKERPETKF
IIAGKGPNLEHLKSLAAHIGVSDRIYFTGFVSDEVRNKLYQAADIAVFPSLYEPFGIVALEAMATKTPVVVSNTGGLSEF
VTHNQNGVKVNVNDPHHLAREVIDLLKEKNRAKKLARNGYKMVEEEYSWKKIAGKTARVYRNVLSEYENSNWNKNKERTY
IKNEEDSPVYRYLFKRKFS

Sequences:

>Translated_419_residues
MKVLMLSWEYPPVSFGGLARHVQDLSEALVEQGHQVYVITQGSSDTSEKEEINGVRVLRTAPVQVNANNFVDYILQLNFQ
ILEKAFGLMPGGIDIIHGHDWLVFWSSKVMKHALKKPLVYTIHATEYGRNHGIYNDMQRYINDLEWYSCFEAWRVIVCSD
YMNQEVKNLFQLPSDKVIKIENGVDPEKYKARCTPEFRQKYADPSEDIVFYVGRMVREKGVQVLIRSIPEILKERPETKF
IIAGKGPNLEHLKSLAAHIGVSDRIYFTGFVSDEVRNKLYQAADIAVFPSLYEPFGIVALEAMATKTPVVVSNTGGLSEF
VTHNQNGVKVNVNDPHHLAREVIDLLKEKNRAKKLARNGYKMVEEEYSWKKIAGKTARVYRNVLSEYENSNWNKNKERTY
IKNEEDSPVYRYLFKRKFS
>Mature_419_residues
MKVLMLSWEYPPVSFGGLARHVQDLSEALVEQGHQVYVITQGSSDTSEKEEINGVRVLRTAPVQVNANNFVDYILQLNFQ
ILEKAFGLMPGGIDIIHGHDWLVFWSSKVMKHALKKPLVYTIHATEYGRNHGIYNDMQRYINDLEWYSCFEAWRVIVCSD
YMNQEVKNLFQLPSDKVIKIENGVDPEKYKARCTPEFRQKYADPSEDIVFYVGRMVREKGVQVLIRSIPEILKERPETKF
IIAGKGPNLEHLKSLAAHIGVSDRIYFTGFVSDEVRNKLYQAADIAVFPSLYEPFGIVALEAMATKTPVVVSNTGGLSEF
VTHNQNGVKVNVNDPHHLAREVIDLLKEKNRAKKLARNGYKMVEEEYSWKKIAGKTARVYRNVLSEYENSNWNKNKERTY
IKNEEDSPVYRYLFKRKFS

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=400, Percent_Identity=25.5, Blast_Score=96, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17532709, Length=384, Percent_Identity=23.9583333333333, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32564184, Length=400, Percent_Identity=22.75, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17569999, Length=189, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=407, Percent_Identity=25.3071253071253, Blast_Score=110, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 48312; Mature: 48312

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLMLSWEYPPVSFGGLARHVQDLSEALVEQGHQVYVITQGSSDTSEKEEINGVRVLRT
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCEEEEEE
APVQVNANNFVDYILQLNFQILEKAFGLMPGGIDIIHGHDWLVFWSSKVMKHALKKPLVY
CCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHCCCEEE
TIHATEYGRNHGIYNDMQRYINDLEWYSCFEAWRVIVCSDYMNQEVKNLFQLPSDKVIKI
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
ENGVDPEKYKARCTPEFRQKYADPSEDIVFYVGRMVREKGVQVLIRSIPEILKERPETKF
CCCCCHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IIAGKGPNLEHLKSLAAHIGVSDRIYFTGFVSDEVRNKLYQAADIAVFPSLYEPFGIVAL
EEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHCCHHHHHH
EAMATKTPVVVSNTGGLSEFVTHNQNGVKVNVNDPHHLAREVIDLLKEKNRAKKLARNGY
HHHHCCCCEEEECCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCH
KMVEEEYSWKKIAGKTARVYRNVLSEYENSNWNKNKERTYIKNEEDSPVYRYLFKRKFS
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKVLMLSWEYPPVSFGGLARHVQDLSEALVEQGHQVYVITQGSSDTSEKEEINGVRVLRT
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCEEEEEE
APVQVNANNFVDYILQLNFQILEKAFGLMPGGIDIIHGHDWLVFWSSKVMKHALKKPLVY
CCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHCCCEEE
TIHATEYGRNHGIYNDMQRYINDLEWYSCFEAWRVIVCSDYMNQEVKNLFQLPSDKVIKI
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
ENGVDPEKYKARCTPEFRQKYADPSEDIVFYVGRMVREKGVQVLIRSIPEILKERPETKF
CCCCCHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IIAGKGPNLEHLKSLAAHIGVSDRIYFTGFVSDEVRNKLYQAADIAVFPSLYEPFGIVAL
EEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHCCHHHHHH
EAMATKTPVVVSNTGGLSEFVTHNQNGVKVNVNDPHHLAREVIDLLKEKNRAKKLARNGY
HHHHCCCCEEEECCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCH
KMVEEEYSWKKIAGKTARVYRNVLSEYENSNWNKNKERTYIKNEEDSPVYRYLFKRKFS
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]