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The map label for this gene is ybhK [C]

Identifier: 220932423

GI number: 220932423

Start: 1700255

End: 1701520

Strand: Reverse

Name: ybhK [C]

Synonym: Hore_15870

Alternate gene names: 220932423

Gene position: 1701520-1700255 (Counterclockwise)

Preceding gene: 220932424

Following gene: 220932422

Centisome position: 66.0

GC content: 42.73

Gene sequence:

>1266_bases
ATGAAGATTTTAAAATGGTTTTATCCCGGAATCGGTATTAAAAGGTGGTTATTCCTGGTCCTGCTGGGTTTAATGCTTAT
CTGGTCAGGAATTATTATCTTAATTGGGGATAAAATGATTTTTTTAATAAATAGATATATCGGGACCTATTTTGTAATTA
ATTCAGTAGTGGCCAGGGTAATTCTGGCTGTGATAATAATTGTACTGGGTGTTATACTAATTGGGGAGTCGATTAAAGGG
GCTATCAGGACTTTCACCCGGGATAACCGGGAGGGAGATGAACTAATAGATAAGTTATACCGGACAAAGATGCTGGAAAA
AGGACCCAGGATTGTGGCTCTGGGAGGGGGAACAGGCCTTTCAACCCTGTTACGGGGGTTAAAAGAATATACCAGTAATA
TAACAGCCATTGTCACAGTGGCTGATGATGGTGGTAGTTCAGGACGGCTCAGGGATGAGCTGGGGATGCTACCACCTGGG
GATATCCGGAACTGCCTGGTGGCCCTGGCTGATACTGAACCCCTTATGGAAAGGCTTTTTCAGTACCGCTTCAGGGCAGA
CGGCACTCTTGATGGTCATAGTTTTGGTAACCTGTTTATAGCTTCTATGACTGAAGTTCTGGGGGATTTTGAACAGGCGG
TTAAAGAATCGAGTAAGGTCCTGGCTATAAAGGGGCAGGTCCTGCCGGCAACCAATGAAGATGTCAGGTTAGGTGCTGTA
TATTCTGATAATACTGTCAGGATGGGGGAATCATCTATACCCCGGGAGCATAAAAAAATAAAGAGGGTCTTTTTACAACC
AGGGGCCTGTCGACCAACAGATGATGCTTTGAATGCTATCAGGCAGGCAGATATTATTATAATTGGTCCCGGAAGTCTGT
ATACAAGTATTATGCCCAATTTACTGATCAAGGGGATTGCTGAAGAGATTAAAAATAGTACTGCCCTAAAAATGTATATC
AGCAACGTAATGACTCAGCCCGGTGAGACCACCGGTTATAGAACCAGTGATCATATCCAGGCTATTATAGACCATGTTGG
TAATGGCCTATTTGATTATGTTGTTGTAAACACTGGAGATATACCGAAAAACCTTGCCCAAAAATATAAAATGGAGGGAT
CTTATCCAGTTAAAGTTGACCGCAAGAAGGTTCTGAGTCAGGGGGTCAATATAATTAAAGGTGATCTGTTGTCCCGGGAT
GGTTATATCAGACATGATCCCTCTAAACTGGCTGAGACTATTTTAAAAGTATATCGAGGCAGGTGA

Upstream 100 bases:

>100_bases
ATTTTTGTTGAGCAAAGGATACCACGTTGTTGTGGAACATAAAGATATTAGTAAGTAAATGAATTTAAGGCAAAACCGTA
AATCATAGAAGGTGTTTAGC

Downstream 100 bases:

>100_bases
ACCATTTAATGTCTTTTACTGACCAGGTAAAACATGAGGTTTCCAGGCTTGAAAGTAACAATAAAATGTGTCAACTGGCA
GAATTATCTGCCCTGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKILKWFYPGIGIKRWLFLVLLGLMLIWSGIIILIGDKMIFLINRYIGTYFVINSVVARVILAVIIIVLGVILIGESIKG
AIRTFTRDNREGDELIDKLYRTKMLEKGPRIVALGGGTGLSTLLRGLKEYTSNITAIVTVADDGGSSGRLRDELGMLPPG
DIRNCLVALADTEPLMERLFQYRFRADGTLDGHSFGNLFIASMTEVLGDFEQAVKESSKVLAIKGQVLPATNEDVRLGAV
YSDNTVRMGESSIPREHKKIKRVFLQPGACRPTDDALNAIRQADIIIIGPGSLYTSIMPNLLIKGIAEEIKNSTALKMYI
SNVMTQPGETTGYRTSDHIQAIIDHVGNGLFDYVVVNTGDIPKNLAQKYKMEGSYPVKVDRKKVLSQGVNIIKGDLLSRD
GYIRHDPSKLAETILKVYRGR

Sequences:

>Translated_421_residues
MKILKWFYPGIGIKRWLFLVLLGLMLIWSGIIILIGDKMIFLINRYIGTYFVINSVVARVILAVIIIVLGVILIGESIKG
AIRTFTRDNREGDELIDKLYRTKMLEKGPRIVALGGGTGLSTLLRGLKEYTSNITAIVTVADDGGSSGRLRDELGMLPPG
DIRNCLVALADTEPLMERLFQYRFRADGTLDGHSFGNLFIASMTEVLGDFEQAVKESSKVLAIKGQVLPATNEDVRLGAV
YSDNTVRMGESSIPREHKKIKRVFLQPGACRPTDDALNAIRQADIIIIGPGSLYTSIMPNLLIKGIAEEIKNSTALKMYI
SNVMTQPGETTGYRTSDHIQAIIDHVGNGLFDYVVVNTGDIPKNLAQKYKMEGSYPVKVDRKKVLSQGVNIIKGDLLSRD
GYIRHDPSKLAETILKVYRGR
>Mature_421_residues
MKILKWFYPGIGIKRWLFLVLLGLMLIWSGIIILIGDKMIFLINRYIGTYFVINSVVARVILAVIIIVLGVILIGESIKG
AIRTFTRDNREGDELIDKLYRTKMLEKGPRIVALGGGTGLSTLLRGLKEYTSNITAIVTVADDGGSSGRLRDELGMLPPG
DIRNCLVALADTEPLMERLFQYRFRADGTLDGHSFGNLFIASMTEVLGDFEQAVKESSKVLAIKGQVLPATNEDVRLGAV
YSDNTVRMGESSIPREHKKIKRVFLQPGACRPTDDALNAIRQADIIIIGPGSLYTSIMPNLLIKGIAEEIKNSTALKMYI
SNVMTQPGETTGYRTSDHIQAIIDHVGNGLFDYVVVNTGDIPKNLAQKYKMEGSYPVKVDRKKVLSQGVNIIKGDLLSRD
GYIRHDPSKLAETILKVYRGR

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=259, Percent_Identity=34.3629343629344, Blast_Score=135, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 46558; Mature: 46558

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILKWFYPGIGIKRWLFLVLLGLMLIWSGIIILIGDKMIFLINRYIGTYFVINSVVARV
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
ILAVIIIVLGVILIGESIKGAIRTFTRDNREGDELIDKLYRTKMLEKGPRIVALGGGTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCH
STLLRGLKEYTSNITAIVTVADDGGSSGRLRDELGMLPPGDIRNCLVALADTEPLMERLF
HHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHH
QYRFRADGTLDGHSFGNLFIASMTEVLGDFEQAVKESSKVLAIKGQVLPATNEDVRLGAV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEECCCCCCEEEEEE
YSDNTVRMGESSIPREHKKIKRVFLQPGACRPTDDALNAIRQADIIIIGPGSLYTSIMPN
ECCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHH
LLIKGIAEEIKNSTALKMYISNVMTQPGETTGYRTSDHIQAIIDHVGNGLFDYVVVNTGD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCC
IPKNLAQKYKMEGSYPVKVDRKKVLSQGVNIIKGDLLSRDGYIRHDPSKLAETILKVYRG
CCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure
MKILKWFYPGIGIKRWLFLVLLGLMLIWSGIIILIGDKMIFLINRYIGTYFVINSVVARV
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
ILAVIIIVLGVILIGESIKGAIRTFTRDNREGDELIDKLYRTKMLEKGPRIVALGGGTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCH
STLLRGLKEYTSNITAIVTVADDGGSSGRLRDELGMLPPGDIRNCLVALADTEPLMERLF
HHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHH
QYRFRADGTLDGHSFGNLFIASMTEVLGDFEQAVKESSKVLAIKGQVLPATNEDVRLGAV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEECCCCCCEEEEEE
YSDNTVRMGESSIPREHKKIKRVFLQPGACRPTDDALNAIRQADIIIIGPGSLYTSIMPN
ECCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHH
LLIKGIAEEIKNSTALKMYISNVMTQPGETTGYRTSDHIQAIIDHVGNGLFDYVVVNTGD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCC
IPKNLAQKYKMEGSYPVKVDRKKVLSQGVNIIKGDLLSRDGYIRHDPSKLAETILKVYRG
CCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]