Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932406

Identifier: 220932406

GI number: 220932406

Start: 1680457

End: 1681530

Strand: Reverse

Name: 220932406

Synonym: Hore_15700

Alternate gene names: NA

Gene position: 1681530-1680457 (Counterclockwise)

Preceding gene: 220932407

Following gene: 220932405

Centisome position: 65.22

GC content: 37.24

Gene sequence:

>1074_bases
ATGAAAAGTAAAAGTATTGCGGCTGTTTTTGCAATGATTATGATATTGGTGTTGGCGGTTAGTTCAACTGGTGCAACACA
AAGTGACATATCCTCACCACCGTCGCAATCTTCTGGACAAATTTACCTATATGGGGAAGTGCATGGTGTAGATAAAATTA
TAGATAAAGAATTTGAATTATGGTATGATTACTACCACAACCAGAATATGAGACATTTATTTTTAGAACTTCCGTACTAT
ACCGCAGAATTTTTGAACATATGGATGCAATCAGATAGCGACGATATTCTGAATAATCTATATTTTGATTGGGCTAATAC
TGCTCTATGTAACCCTGAATATAAAGAGTTTTTCAAGAAGATAAAAATCCATTGTCCTGAAACGATTTTCCACGGGACAG
ATATCGGGCATCGATATAATAGTATAGGAGTACGTTTTCTGAAATATCTTCGAAGTAATAACCTGGAGGACTCAGAGCAA
TACCTGAGAGCAAAAGAGGTGATAGAGCAGGGCAAGAAGTTTTATTCTGATAAAGACCATGTTTATCGTGAAAACATGAT
GGTGGAGAATTTTATCCGCGAATTTGATCAATTAAAAGGCGAAAGCATAATGGGGATTTATGGTGCCGCACATACCGGGC
TGGAGGCGATGGACCATACTAATTCTGTTCCGTGCATGGCAAATCAATTGAAGGAACGTTATGGTGATGCTATACACTCA
GTAGATTTATTTATTTTGGTGAAGGATATTGAACCGTACCGGGTAGATATAATCCAGGTTGGTGGAAAAGAGTATGAGGC
AATGTATTTTGGGAAACAGGAGTTGACAGGATTTAAAGAAGATTATGTCTATAGGGAATTTTGGCGTCTGGAGAATGCAT
ATGAAGATTTTGAGGATAGTCCTAAAACAGGGTATGTAATGCCTTACGACAATTATCCGATGCTGATAGAAACAGGACAG
GTTTTTGTTATAGATTATATTAAAAAAGATGGTTCTATTATACGAAAGTACTTTCGCTCCGATGGGCTTGTATGGGAAAA
CATCCAGTATACAGAGGAGTTTATAGTAGAGTGA

Upstream 100 bases:

>100_bases
TTTTTAAATGTCGAAACATGTCCACTTAAATCAGTAACGATGTTTTAAAATTGGTATCCTGTTAGTGAAAATTATTTTTA
TTTAGTGAGGTGATAGGGAA

Downstream 100 bases:

>100_bases
CAAAAGTATAATGCAGATATATGCGCATCAAGTAGTACTTCGTCCCTAATGTTCTATATGTTAGGATAGTTGTCGTAGGT
CGTAGAGAGTAAAATCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFELWYDYYHNQNMRHLFLELPYY
TAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKKIKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQ
YLRAKEVIEQGKKFYSDKDHVYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS
VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDSPKTGYVMPYDNYPMLIETGQ
VFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE

Sequences:

>Translated_357_residues
MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFELWYDYYHNQNMRHLFLELPYY
TAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKKIKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQ
YLRAKEVIEQGKKFYSDKDHVYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS
VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDSPKTGYVMPYDNYPMLIETGQ
VFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE
>Mature_357_residues
MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFELWYDYYHNQNMRHLFLELPYY
TAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKKIKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQ
YLRAKEVIEQGKKFYSDKDHVYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS
VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDSPKTGYVMPYDNYPMLIETGQ
VFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41970; Mature: 41970

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFEL
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHH
WYDYYHNQNMRHLFLELPYYTAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKK
HHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
IKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQYLRAKEVIEQGKKFYSDKDH
HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH
VYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCHHHHHHHHHHCHHHHH
VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDS
EEEEEEEECCCCEEEEEEEECCCEEEHEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PKTGYVMPYDNYPMLIETGQVFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE
CCCCEEEECCCCCEEEECCCEEEEEEECCCHHHHHHHHHCCCCEECCCHHHHHHHCC
>Mature Secondary Structure
MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFEL
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHH
WYDYYHNQNMRHLFLELPYYTAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKK
HHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
IKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQYLRAKEVIEQGKKFYSDKDH
HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH
VYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCHHHHHHHHHHCHHHHH
VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDS
EEEEEEEECCCCEEEEEEEECCCEEEHEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PKTGYVMPYDNYPMLIETGQVFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE
CCCCEEEECCCCCEEEECCCEEEEEEECCCHHHHHHHHHCCCCEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA