| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932406
Identifier: 220932406
GI number: 220932406
Start: 1680457
End: 1681530
Strand: Reverse
Name: 220932406
Synonym: Hore_15700
Alternate gene names: NA
Gene position: 1681530-1680457 (Counterclockwise)
Preceding gene: 220932407
Following gene: 220932405
Centisome position: 65.22
GC content: 37.24
Gene sequence:
>1074_bases ATGAAAAGTAAAAGTATTGCGGCTGTTTTTGCAATGATTATGATATTGGTGTTGGCGGTTAGTTCAACTGGTGCAACACA AAGTGACATATCCTCACCACCGTCGCAATCTTCTGGACAAATTTACCTATATGGGGAAGTGCATGGTGTAGATAAAATTA TAGATAAAGAATTTGAATTATGGTATGATTACTACCACAACCAGAATATGAGACATTTATTTTTAGAACTTCCGTACTAT ACCGCAGAATTTTTGAACATATGGATGCAATCAGATAGCGACGATATTCTGAATAATCTATATTTTGATTGGGCTAATAC TGCTCTATGTAACCCTGAATATAAAGAGTTTTTCAAGAAGATAAAAATCCATTGTCCTGAAACGATTTTCCACGGGACAG ATATCGGGCATCGATATAATAGTATAGGAGTACGTTTTCTGAAATATCTTCGAAGTAATAACCTGGAGGACTCAGAGCAA TACCTGAGAGCAAAAGAGGTGATAGAGCAGGGCAAGAAGTTTTATTCTGATAAAGACCATGTTTATCGTGAAAACATGAT GGTGGAGAATTTTATCCGCGAATTTGATCAATTAAAAGGCGAAAGCATAATGGGGATTTATGGTGCCGCACATACCGGGC TGGAGGCGATGGACCATACTAATTCTGTTCCGTGCATGGCAAATCAATTGAAGGAACGTTATGGTGATGCTATACACTCA GTAGATTTATTTATTTTGGTGAAGGATATTGAACCGTACCGGGTAGATATAATCCAGGTTGGTGGAAAAGAGTATGAGGC AATGTATTTTGGGAAACAGGAGTTGACAGGATTTAAAGAAGATTATGTCTATAGGGAATTTTGGCGTCTGGAGAATGCAT ATGAAGATTTTGAGGATAGTCCTAAAACAGGGTATGTAATGCCTTACGACAATTATCCGATGCTGATAGAAACAGGACAG GTTTTTGTTATAGATTATATTAAAAAAGATGGTTCTATTATACGAAAGTACTTTCGCTCCGATGGGCTTGTATGGGAAAA CATCCAGTATACAGAGGAGTTTATAGTAGAGTGA
Upstream 100 bases:
>100_bases TTTTTAAATGTCGAAACATGTCCACTTAAATCAGTAACGATGTTTTAAAATTGGTATCCTGTTAGTGAAAATTATTTTTA TTTAGTGAGGTGATAGGGAA
Downstream 100 bases:
>100_bases CAAAAGTATAATGCAGATATATGCGCATCAAGTAGTACTTCGTCCCTAATGTTCTATATGTTAGGATAGTTGTCGTAGGT CGTAGAGAGTAAAATCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFELWYDYYHNQNMRHLFLELPYY TAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKKIKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQ YLRAKEVIEQGKKFYSDKDHVYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDSPKTGYVMPYDNYPMLIETGQ VFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE
Sequences:
>Translated_357_residues MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFELWYDYYHNQNMRHLFLELPYY TAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKKIKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQ YLRAKEVIEQGKKFYSDKDHVYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDSPKTGYVMPYDNYPMLIETGQ VFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE >Mature_357_residues MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFELWYDYYHNQNMRHLFLELPYY TAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKKIKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQ YLRAKEVIEQGKKFYSDKDHVYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDSPKTGYVMPYDNYPMLIETGQ VFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41970; Mature: 41970
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFEL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHH WYDYYHNQNMRHLFLELPYYTAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKK HHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH IKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQYLRAKEVIEQGKKFYSDKDH HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH VYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCHHHHHHHHHHCHHHHH VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDS EEEEEEEECCCCEEEEEEEECCCEEEHEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PKTGYVMPYDNYPMLIETGQVFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE CCCCEEEECCCCCEEEECCCEEEEEEECCCHHHHHHHHHCCCCEECCCHHHHHHHCC >Mature Secondary Structure MKSKSIAAVFAMIMILVLAVSSTGATQSDISSPPSQSSGQIYLYGEVHGVDKIIDKEFEL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHH WYDYYHNQNMRHLFLELPYYTAEFLNIWMQSDSDDILNNLYFDWANTALCNPEYKEFFKK HHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH IKIHCPETIFHGTDIGHRYNSIGVRFLKYLRSNNLEDSEQYLRAKEVIEQGKKFYSDKDH HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH VYRENMMVENFIREFDQLKGESIMGIYGAAHTGLEAMDHTNSVPCMANQLKERYGDAIHS HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCHHHHHHHHHHCHHHHH VDLFILVKDIEPYRVDIIQVGGKEYEAMYFGKQELTGFKEDYVYREFWRLENAYEDFEDS EEEEEEEECCCCEEEEEEEECCCEEEHEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PKTGYVMPYDNYPMLIETGQVFVIDYIKKDGSIIRKYFRSDGLVWENIQYTEEFIVE CCCCEEEECCCCCEEEECCCEEEEEEECCCHHHHHHHHHCCCCEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA