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The map label for this gene is 220932386

Identifier: 220932386

GI number: 220932386

Start: 1659425

End: 1659946

Strand: Reverse

Name: 220932386

Synonym: Hore_15500

Alternate gene names: NA

Gene position: 1659946-1659425 (Counterclockwise)

Preceding gene: 220932387

Following gene: 220932385

Centisome position: 64.39

GC content: 37.16

Gene sequence:

>522_bases
ATGATAAATAAAGATAAACTTCTTTTGATAATCATTACACTTGTAGTGATTGGTTTTTTTGCCTTTTATCAATATAATAA
CCAGGAAACTGAACCGACCAATAACGAACTTAAAGAGGTATTACTTTATTTTTCAACCAGTGATGCCATGTATTTAAAGG
CTGAAAAAAGGATGGTAAAAGCTGACCATATTTATCTAAATACCCTTAAGGAACTAATAAAGGGACCTGAAAGTAATAAC
CTTAATCCGACCATACCTGAGGGGGTTGAAATCCTGGACTTGAGGGTTAAAGATGGTATTGCCTATATTGATTTCAACCG
GGCCCTGAAGGATAACCACTGGGGCGGTAGTACAGGAGAGTCAATGACCGTATACTCTATTGTAAATACCATGACCCAGT
TTCCTGAAATTGAAAAAGTTCAGTTCATGCTGGAAGGAGAGAAGATTGAAACCCTGGCCGGGCACATTTATTTAATGCCT
CCCATTGAACCCAATAAAAGGTTGTTAAAACAGGAAACATGA

Upstream 100 bases:

>100_bases
CTGCTGAGGAGTGAGTTGTTCCGGAAGAGAGTGGCCAGGGCCCTCTATCGGGGTATATTAAATTATATTAAAAAAATTGA
ACAGGGAGATGGAAACACCC

Downstream 100 bases:

>100_bases
GAAAAGAGGGTCGACAGGGCCCTCTTTTTTCAAAATATAAACAGGAATTTATATACATAATATAGAAAATATTATTAAAC
AGATTGATTAACAATTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: Spore Germination Protein-Like Protein; Germination Protein GerM; Lipoprotein LpqB GerMN Domain; Spore Germination Protein; Spore Germination Protein-Like; Cell Wall Hydrolase/Autolysin; Germane Superfamily Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MINKDKLLLIIITLVVIGFFAFYQYNNQETEPTNNELKEVLLYFSTSDAMYLKAEKRMVKADHIYLNTLKELIKGPESNN
LNPTIPEGVEILDLRVKDGIAYIDFNRALKDNHWGGSTGESMTVYSIVNTMTQFPEIEKVQFMLEGEKIETLAGHIYLMP
PIEPNKRLLKQET

Sequences:

>Translated_173_residues
MINKDKLLLIIITLVVIGFFAFYQYNNQETEPTNNELKEVLLYFSTSDAMYLKAEKRMVKADHIYLNTLKELIKGPESNN
LNPTIPEGVEILDLRVKDGIAYIDFNRALKDNHWGGSTGESMTVYSIVNTMTQFPEIEKVQFMLEGEKIETLAGHIYLMP
PIEPNKRLLKQET
>Mature_173_residues
MINKDKLLLIIITLVVIGFFAFYQYNNQETEPTNNELKEVLLYFSTSDAMYLKAEKRMVKADHIYLNTLKELIKGPESNN
LNPTIPEGVEILDLRVKDGIAYIDFNRALKDNHWGGSTGESMTVYSIVNTMTQFPEIEKVQFMLEGEKIETLAGHIYLMP
PIEPNKRLLKQET

Specific function: Unknown

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19903; Mature: 19903

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKDKLLLIIITLVVIGFFAFYQYNNQETEPTNNELKEVLLYFSTSDAMYLKAEKRMVK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHH
ADHIYLNTLKELIKGPESNNLNPTIPEGVEILDLRVKDGIAYIDFNRALKDNHWGGSTGE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECHHHCCCCCCCCCCC
SMTVYSIVNTMTQFPEIEKVQFMLEGEKIETLAGHIYLMPPIEPNKRLLKQET
CCHHHHHHHHHHHCCCHHHHHEEECCCCEEEEECEEEEECCCCCCHHHHCCCC
>Mature Secondary Structure
MINKDKLLLIIITLVVIGFFAFYQYNNQETEPTNNELKEVLLYFSTSDAMYLKAEKRMVK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHH
ADHIYLNTLKELIKGPESNNLNPTIPEGVEILDLRVKDGIAYIDFNRALKDNHWGGSTGE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECHHHCCCCCCCCCCC
SMTVYSIVNTMTQFPEIEKVQFMLEGEKIETLAGHIYLMPPIEPNKRLLKQET
CCHHHHHHHHHHHCCCHHHHHEEECCCCEEEEECEEEEECCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA