| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932366
Identifier: 220932366
GI number: 220932366
Start: 1636183
End: 1637787
Strand: Reverse
Name: 220932366
Synonym: Hore_15300
Alternate gene names: NA
Gene position: 1637787-1636183 (Counterclockwise)
Preceding gene: 220932367
Following gene: 220932365
Centisome position: 63.53
GC content: 40.69
Gene sequence:
>1605_bases ATGAATAAATTAAAATCACTGACACTTATTCAGATTAAAGATTTTATCGGCAGGGCTCAGGAGAGTATTAATGTAAAAAA TAATAAACTGGCCCGGTTACTCCAGGTTGCCCTTGTATTTATCCTGGCAATACCGGCTATTAACTTCTCGATATTGACCT TTGATGCCTTTGCTAAACTTAATCACCCGGAACTGATGATTACAACAATGTATGTCAATGCCGTAATGCTAATGTTTTTC CTCGGGCTTCCCTTTATAGTCTCTGTTTTTTTCTTTGCCAGAGACCTTAAGTTTCTGACAGCCCTGCCCGTCAGAGAGGA TACTATTGTCTTTGCCAAGCTGAGTACGGTCTATATTTATCTACTGGGGATAACCCTGATTTTTATGGGGCCGGCTTTTA TTGTTTACATTATTAAAATCGGGCTTACCCTGCAATTTTTTCTGCTGGGGCTTTTAGTCTTATTACTGGCTCCTGTACTC CCATTATTGATTTCGGCATTACTGGTTTTATTACTCAACAGGTTTTTAATAGATAATAGCCGTCGTAATCTCTTTACAAT TTTGAGTAATTTTTTACTACTAATAGCTATAATATTTATCCAGATGACCCTGACCAGGTATCTTGCCAATCCTGAATTTA TCCAGAAGGCCCTGGTAACAAAAGAGGGGCTTCTGGGGTTGGTTGGCTTAAGGTTCCCCCCCAGTATCTGGATGACCAGG ATGCTTATGGGGTCACCCAGGTATGGCCTGTATTTTATAGGGCTTAATGTGGTCTTCTTTTTTATCCTGCAGTCATTGGC CAGACTTTTTTTCAGGCGGGCTCTTATGGCCTATTCCCAGGATGTTTCCCGGGCCTCAGGTAAGATATATTACAGGCAAC ACAGCCAGGGTTATCAGCTGCTTAAACGTAATATTCTGATTATCTTAAAACAGCCGACCTTTTTTATGAATACTTTCCTC ACCATTCTGGTTCCGGTAATAATGTTTCTTGTCCTCAGTATCAGTGGGCAGTTTTCCCTTGAAATGCTCAATAATCCCGG AATGAAACCCTTTTTAATACTGATTTTTACGGGGATAATTACATCACCGGCCATAGTGGGAAATACATCAGCAACGGCCA TAACCAGGGAAGGGCAGGCCTTCTGGGAGACAAAAGTGCTACCTATAAAGGCAGCAGATAATATACGTTACCGGGTTTTA ACCACAGTTTTGATAAGCCTGTTTGGTTCGGCTTTGCTTCTGACTGTTTCTGCCTTCATTATGCCTCTGACAGTAAAGAT GATAATGCTGGGTAGCTTTTTCTGCCTGGGGGCAACCCTGTTTCTATCGACTGTGGATATAATAATTGATATTTACCGGC CCATTTTGAACTGGACTAATCCCACCGCTGCTGTAAAGAATAACATGAATATAACTGTGTCCCTGGGAATAAGGGCTTTA CTGGCTCTTGTGGTTTATCTCATATACCGTATCGCTCCTGGTTTTATTATGAGTTTTGATACGGCAATCTTATGGGGAGG TATAGTATTCTTTATCCTGTACTTTGCTGTCAGGTACTATGTTTACAATTACCTGGATAAAGTTTTTTTGAACATCTCCA TATAA
Upstream 100 bases:
>100_bases ATTATTAACAGGGGGAAATTGATTGCCTGTGATACCCTGGAAAACATCAAGAGAAATAAAGATAAAACCCTTGAAGATAT TTTCCTGGAGTTGACTGATA
Downstream 100 bases:
>100_bases TGGTAAGTACTATGTAAAAGTATGGGAGGTAGACTGGATTGCAGCAAAAGAAATTGAGTCCAGAAAATGTATATAAGGCT TCCAGAATTTTAGATCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MNKLKSLTLIQIKDFIGRAQESINVKNNKLARLLQVALVFILAIPAINFSILTFDAFAKLNHPELMITTMYVNAVMLMFF LGLPFIVSVFFFARDLKFLTALPVREDTIVFAKLSTVYIYLLGITLIFMGPAFIVYIIKIGLTLQFFLLGLLVLLLAPVL PLLISALLVLLLNRFLIDNSRRNLFTILSNFLLLIAIIFIQMTLTRYLANPEFIQKALVTKEGLLGLVGLRFPPSIWMTR MLMGSPRYGLYFIGLNVVFFFILQSLARLFFRRALMAYSQDVSRASGKIYYRQHSQGYQLLKRNILIILKQPTFFMNTFL TILVPVIMFLVLSISGQFSLEMLNNPGMKPFLILIFTGIITSPAIVGNTSATAITREGQAFWETKVLPIKAADNIRYRVL TTVLISLFGSALLLTVSAFIMPLTVKMIMLGSFFCLGATLFLSTVDIIIDIYRPILNWTNPTAAVKNNMNITVSLGIRAL LALVVYLIYRIAPGFIMSFDTAILWGGIVFFILYFAVRYYVYNYLDKVFLNISI
Sequences:
>Translated_534_residues MNKLKSLTLIQIKDFIGRAQESINVKNNKLARLLQVALVFILAIPAINFSILTFDAFAKLNHPELMITTMYVNAVMLMFF LGLPFIVSVFFFARDLKFLTALPVREDTIVFAKLSTVYIYLLGITLIFMGPAFIVYIIKIGLTLQFFLLGLLVLLLAPVL PLLISALLVLLLNRFLIDNSRRNLFTILSNFLLLIAIIFIQMTLTRYLANPEFIQKALVTKEGLLGLVGLRFPPSIWMTR MLMGSPRYGLYFIGLNVVFFFILQSLARLFFRRALMAYSQDVSRASGKIYYRQHSQGYQLLKRNILIILKQPTFFMNTFL TILVPVIMFLVLSISGQFSLEMLNNPGMKPFLILIFTGIITSPAIVGNTSATAITREGQAFWETKVLPIKAADNIRYRVL TTVLISLFGSALLLTVSAFIMPLTVKMIMLGSFFCLGATLFLSTVDIIIDIYRPILNWTNPTAAVKNNMNITVSLGIRAL LALVVYLIYRIAPGFIMSFDTAILWGGIVFFILYFAVRYYVYNYLDKVFLNISI >Mature_534_residues MNKLKSLTLIQIKDFIGRAQESINVKNNKLARLLQVALVFILAIPAINFSILTFDAFAKLNHPELMITTMYVNAVMLMFF LGLPFIVSVFFFARDLKFLTALPVREDTIVFAKLSTVYIYLLGITLIFMGPAFIVYIIKIGLTLQFFLLGLLVLLLAPVL PLLISALLVLLLNRFLIDNSRRNLFTILSNFLLLIAIIFIQMTLTRYLANPEFIQKALVTKEGLLGLVGLRFPPSIWMTR MLMGSPRYGLYFIGLNVVFFFILQSLARLFFRRALMAYSQDVSRASGKIYYRQHSQGYQLLKRNILIILKQPTFFMNTFL TILVPVIMFLVLSISGQFSLEMLNNPGMKPFLILIFTGIITSPAIVGNTSATAITREGQAFWETKVLPIKAADNIRYRVL TTVLISLFGSALLLTVSAFIMPLTVKMIMLGSFFCLGATLFLSTVDIIIDIYRPILNWTNPTAAVKNNMNITVSLGIRAL LALVVYLIYRIAPGFIMSFDTAILWGGIVFFILYFAVRYYVYNYLDKVFLNISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60487; Mature: 60487
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKSLTLIQIKDFIGRAQESINVKNNKLARLLQVALVFILAIPAINFSILTFDAFAKL CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHC NHPELMITTMYVNAVMLMFFLGLPFIVSVFFFARDLKFLTALPVREDTIVFAKLSTVYIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHH LLGITLIFMGPAFIVYIIKIGLTLQFFLLGLLVLLLAPVLPLLISALLVLLLNRFLIDNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RRNLFTILSNFLLLIAIIFIQMTLTRYLANPEFIQKALVTKEGLLGLVGLRFPPSIWMTR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHH MLMGSPRYGLYFIGLNVVFFFILQSLARLFFRRALMAYSQDVSRASGKIYYRQHSQGYQL HHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH LKRNILIILKQPTFFMNTFLTILVPVIMFLVLSISGQFSLEMLNNPGMKPFLILIFTGII HHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH TSPAIVGNTSATAITREGQAFWETKVLPIKAADNIRYRVLTTVLISLFGSALLLTVSAFI CCCCEECCCCCCEEECCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MPLTVKMIMLGSFFCLGATLFLSTVDIIIDIYRPILNWTNPTAAVKNNMNITVSLGIRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEHHHHHH LALVVYLIYRIAPGFIMSFDTAILWGGIVFFILYFAVRYYVYNYLDKVFLNISI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MNKLKSLTLIQIKDFIGRAQESINVKNNKLARLLQVALVFILAIPAINFSILTFDAFAKL CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHC NHPELMITTMYVNAVMLMFFLGLPFIVSVFFFARDLKFLTALPVREDTIVFAKLSTVYIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHH LLGITLIFMGPAFIVYIIKIGLTLQFFLLGLLVLLLAPVLPLLISALLVLLLNRFLIDNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RRNLFTILSNFLLLIAIIFIQMTLTRYLANPEFIQKALVTKEGLLGLVGLRFPPSIWMTR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHH MLMGSPRYGLYFIGLNVVFFFILQSLARLFFRRALMAYSQDVSRASGKIYYRQHSQGYQL HHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH LKRNILIILKQPTFFMNTFLTILVPVIMFLVLSISGQFSLEMLNNPGMKPFLILIFTGII HHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH TSPAIVGNTSATAITREGQAFWETKVLPIKAADNIRYRVLTTVLISLFGSALLLTVSAFI CCCCEECCCCCCEEECCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MPLTVKMIMLGSFFCLGATLFLSTVDIIIDIYRPILNWTNPTAAVKNNMNITVSLGIRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEHHHHHH LALVVYLIYRIAPGFIMSFDTAILWGGIVFFILYFAVRYYVYNYLDKVFLNISI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA