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The map label for this gene is 220932350

Identifier: 220932350

GI number: 220932350

Start: 1615137

End: 1616114

Strand: Reverse

Name: 220932350

Synonym: Hore_15130

Alternate gene names: NA

Gene position: 1616114-1615137 (Counterclockwise)

Preceding gene: 220932351

Following gene: 220932349

Centisome position: 62.69

GC content: 35.58

Gene sequence:

>978_bases
ATGTATAAGGAAACTGCAATACTTGGTTTATACTGTGAAACTTCTGTACATGCAGGGAGTGGTAGTGATTTAGGTGTTAT
TGATTTACCTATTCAAAGGGAAAAATATACTGACTATCCTGTGTTTCAGGCCTCTACATTAAAAGGTGCCTTGAGGGCAA
GTTTTGATACAGAAATAGCCATTGTTAATTCTTTAATGAAAGGAGTATTTAAAAGTTTTTCATTTAAAAATGCCAAAGAG
GGTGAAGAAGAACTAGAAAAAGCTATAAACCTTGTTTTTGGAGATGAAAGCAATAAATCTGCTTCAGCCCTGGCTTTTAC
AGATGCCAGAATACTATTGTTTCCCGTAAAGTCAGCTAGAAACGTTTTTGCCTGGATAACTTCACCAATGGTCTTAAACA
GGTTGAAAAGGGATCTGGAAGTAGCAGGGATTAATGTCGACTGGGAAGCCCCCGAAATTAAAAAGGATGCGATTATCAGT
GAAAAATCCAGTCTTGATATAGATGGAAATATTATTCTTGAAGAATATACCTATAGTGTTAATAAACAAAATATAGAGGG
AATTACAAACTGGATAAGAGATAATATTTTTGCAGAAGATTATACTTTCTGGAGGGACAAATTGGAAAGTGACCTGGTAA
TAATTGATGATGATGAATTCAAGGATTTTGTCAGTATGTCAACAGAGTTAGTTCCCCGTATCAAAATTAAGAATGAAACT
AAAGTGGTTGATAAAGATGGGGGCGCTCTCTGGTATGAAGAGAATTTACCGCCAGAAACAGTACTATACAGTCTGGTTTT
GGCCACCGATATTTTAAGAGAAGAAAAAGATTTAGAAAATGAAGACCTTAAAAAAGCTGAGAATGTAATACAATTTTTTG
AAGAAGGACTAAAAGAAAGAATACAGCTGGGGGGAAATGAAACCATTGGCCGGGGAATCATTAGAACCAGGCTTGTAAGG
AGTGGTAAAAATGGGTAA

Upstream 100 bases:

>100_bases
TGATATTGAGGAATTAATAAATGAATTACATGGACAATCTATTTCTGATTTAAAAAGCAAAGAAGGTTTTGGTATCTCAT
TTATAGGAGGGATTAAGTAG

Downstream 100 bases:

>100_bases
AAAAGATGAACAGGTAAAAAGGAAAGAAATTGAAAATGGAAGAGCTAAAAAGGCTTATGAGTTTGTAAAAGATGTGAAAG
GTGATAAATTTAAAGAAAAA

Product: CRISPR-associated RAMP protein, Cmr4 family

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; CRISPR-Associated RAMP Cmr4 Family Protein; Cmr4 Family CRISPR-Associated RAMP Protein; CRISPR-Associated Ramp Protein Cmr4 Family; Crispr-Associated Ramp Protein Cmr4 Family; CRISPR-Associated RAMP Protein; Cmr Crispr-Associated Ramp Protein Cmr4 Family

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MYKETAILGLYCETSVHAGSGSDLGVIDLPIQREKYTDYPVFQASTLKGALRASFDTEIAIVNSLMKGVFKSFSFKNAKE
GEEELEKAINLVFGDESNKSASALAFTDARILLFPVKSARNVFAWITSPMVLNRLKRDLEVAGINVDWEAPEIKKDAIIS
EKSSLDIDGNIILEEYTYSVNKQNIEGITNWIRDNIFAEDYTFWRDKLESDLVIIDDDEFKDFVSMSTELVPRIKIKNET
KVVDKDGGALWYEENLPPETVLYSLVLATDILREEKDLENEDLKKAENVIQFFEEGLKERIQLGGNETIGRGIIRTRLVR
SGKNG

Sequences:

>Translated_325_residues
MYKETAILGLYCETSVHAGSGSDLGVIDLPIQREKYTDYPVFQASTLKGALRASFDTEIAIVNSLMKGVFKSFSFKNAKE
GEEELEKAINLVFGDESNKSASALAFTDARILLFPVKSARNVFAWITSPMVLNRLKRDLEVAGINVDWEAPEIKKDAIIS
EKSSLDIDGNIILEEYTYSVNKQNIEGITNWIRDNIFAEDYTFWRDKLESDLVIIDDDEFKDFVSMSTELVPRIKIKNET
KVVDKDGGALWYEENLPPETVLYSLVLATDILREEKDLENEDLKKAENVIQFFEEGLKERIQLGGNETIGRGIIRTRLVR
SGKNG
>Mature_325_residues
MYKETAILGLYCETSVHAGSGSDLGVIDLPIQREKYTDYPVFQASTLKGALRASFDTEIAIVNSLMKGVFKSFSFKNAKE
GEEELEKAINLVFGDESNKSASALAFTDARILLFPVKSARNVFAWITSPMVLNRLKRDLEVAGINVDWEAPEIKKDAIIS
EKSSLDIDGNIILEEYTYSVNKQNIEGITNWIRDNIFAEDYTFWRDKLESDLVIIDDDEFKDFVSMSTELVPRIKIKNET
KVVDKDGGALWYEENLPPETVLYSLVLATDILREEKDLENEDLKKAENVIQFFEEGLKERIQLGGNETIGRGIIRTRLVR
SGKNG

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36728; Mature: 36728

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKETAILGLYCETSVHAGSGSDLGVIDLPIQREKYTDYPVFQASTLKGALRASFDTEIA
CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCHHHH
IVNSLMKGVFKSFSFKNAKEGEEELEKAINLVFGDESNKSASALAFTDARILLFPVKSAR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCEEEEEECCCCC
NVFAWITSPMVLNRLKRDLEVAGINVDWEAPEIKKDAIISEKSSLDIDGNIILEEYTYSV
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECC
NKQNIEGITNWIRDNIFAEDYTFWRDKLESDLVIIDDDEFKDFVSMSTELVPRIKIKNET
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCEEEECCCC
KVVDKDGGALWYEENLPPETVLYSLVLATDILREEKDLENEDLKKAENVIQFFEEGLKER
EEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IQLGGNETIGRGIIRTRLVRSGKNG
HHCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYKETAILGLYCETSVHAGSGSDLGVIDLPIQREKYTDYPVFQASTLKGALRASFDTEIA
CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCHHHH
IVNSLMKGVFKSFSFKNAKEGEEELEKAINLVFGDESNKSASALAFTDARILLFPVKSAR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCEEEEEECCCCC
NVFAWITSPMVLNRLKRDLEVAGINVDWEAPEIKKDAIISEKSSLDIDGNIILEEYTYSV
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECC
NKQNIEGITNWIRDNIFAEDYTFWRDKLESDLVIIDDDEFKDFVSMSTELVPRIKIKNET
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCEEEECCCC
KVVDKDGGALWYEENLPPETVLYSLVLATDILREEKDLENEDLKKAENVIQFFEEGLKER
EEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IQLGGNETIGRGIIRTRLVRSGKNG
HHCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA