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The map label for this gene is 220932346

Identifier: 220932346

GI number: 220932346

Start: 1611114

End: 1612403

Strand: Reverse

Name: 220932346

Synonym: Hore_15090

Alternate gene names: NA

Gene position: 1612403-1611114 (Counterclockwise)

Preceding gene: 220932347

Following gene: 220932345

Centisome position: 62.54

GC content: 27.44

Gene sequence:

>1290_bases
TTGAAACTGGGGAAATTTATTTCAGTTTTGGGTAAATCTAATTATGTACCGTGTAATTATGGGCAATATAAAAATGTCAA
CTATATACAGGAAGCTCTGGTTAGAAAATATAAAGATAAAATAAGTGATGTAATAATCTTTGCAACTAAAGAGGCGATTA
AAAGTAACTGGCTGGGGGAAGGCTCATTAAAAAATAAGTTTGATGGGTTGCAAGAACAAGGAATAGAATTTAATTATAAG
ATAAAAGAGATTCCTCTTGGAGCAAGTGAGGATGAAGTATGGGAAATATTTGATATTATTGTTGAAGAAATAAATGAAGG
TGACTCCTTATATCTGGATATAACCCATGGTTTTAGATTTCAACCAATGTTAATTATGAGTATTATGAACTATGTAAAAC
TAATAAAAAATGTTACTGTTGAAAGTATTGAATATGGTATGTTTGAAATATTAGGAACACGTCAGGAAGTAGAAATAATA
CCAGTTGAAGAAAGAAATGCTCCTATTGTTGACCTTACTTTGCTTGATCAGTTAAATGACTGGGTAGTTGCAACTGATAG
CTTTTTAACTACCGGAAGTGTTACTAAAATAGATGAGTTGACAAAAAATGAAATTGGTCAAGTACTGGCTTTAACAAAAG
GGAGAAATGAATTTTTCCAAAATCTTAAATCACTTGTAAATAATTTAAAGGACTTTTATGATTGTGTTAACACTTCAAGA
GGTAATAAACTTAACGAAACAATTATAAATATCCTCAAAAACTTAAAAGATTTAGACGAATTCAATCAGGTTAATGATTT
AAAGAATAAAAGAATAAAACCATTTTTGCAAATAATAGATAAAATTTATGATAAATTTAAAGGTTTTAGTTCAAAAGATA
AATCAGACATAGCAAACTATTTTATGGTATTAAATTGGTGTAATGAGAATAATTTTATTCAGCAAGGTTTAGTAATATTA
AGGGAAAATATAATATCGTTTATTATTTTTAATATGGGATATGATTATACAATAAATGATTATCGATTTGATGTGAGTAA
AGCCCTGTCATATCTGGATGGGAGAAAGAAAAGAGAAATATATAAAAATAAAGAATTTTATTTAAAAGTAAAAGAATTTA
TAAGTAACAATTACCCCTACTTACCTAAATTATTTTCTGAAGTCGGGGACACAAGAAATGATATTAGCCACTTTGGACTA
ACTAAATGTCCTATTTCAAATCCTAATAAATTTAAGGATAAATTAAAAGAATTCATTGAGCAAATAGAACCTCTCGTTTC
AAATTTGTAA

Upstream 100 bases:

>100_bases
AATATGATAATTTCTGCAAAGCACCTCGAAATTCGAATGAGTATCAGTTTAATAAATGTATTATTAAAAAGAGTAATAAA
TCAATTGAGAGGTGTTAATA

Downstream 100 bases:

>100_bases
GTCATATAATTGATGCAATTTAGTTAATATATTAATTAATAGGTAATACATTTATGGCAGATTTATATTTAATATTTTCA
CATACATTAACCGAGAATCA

Product: CRISPR-associated protein, TM1812 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKLGKFISVLGKSNYVPCNYGQYKNVNYIQEALVRKYKDKISDVIIFATKEAIKSNWLGEGSLKNKFDGLQEQGIEFNYK
IKEIPLGASEDEVWEIFDIIVEEINEGDSLYLDITHGFRFQPMLIMSIMNYVKLIKNVTVESIEYGMFEILGTRQEVEII
PVEERNAPIVDLTLLDQLNDWVVATDSFLTTGSVTKIDELTKNEIGQVLALTKGRNEFFQNLKSLVNNLKDFYDCVNTSR
GNKLNETIINILKNLKDLDEFNQVNDLKNKRIKPFLQIIDKIYDKFKGFSSKDKSDIANYFMVLNWCNENNFIQQGLVIL
RENIISFIIFNMGYDYTINDYRFDVSKALSYLDGRKKREIYKNKEFYLKVKEFISNNYPYLPKLFSEVGDTRNDISHFGL
TKCPISNPNKFKDKLKEFIEQIEPLVSNL

Sequences:

>Translated_429_residues
MKLGKFISVLGKSNYVPCNYGQYKNVNYIQEALVRKYKDKISDVIIFATKEAIKSNWLGEGSLKNKFDGLQEQGIEFNYK
IKEIPLGASEDEVWEIFDIIVEEINEGDSLYLDITHGFRFQPMLIMSIMNYVKLIKNVTVESIEYGMFEILGTRQEVEII
PVEERNAPIVDLTLLDQLNDWVVATDSFLTTGSVTKIDELTKNEIGQVLALTKGRNEFFQNLKSLVNNLKDFYDCVNTSR
GNKLNETIINILKNLKDLDEFNQVNDLKNKRIKPFLQIIDKIYDKFKGFSSKDKSDIANYFMVLNWCNENNFIQQGLVIL
RENIISFIIFNMGYDYTINDYRFDVSKALSYLDGRKKREIYKNKEFYLKVKEFISNNYPYLPKLFSEVGDTRNDISHFGL
TKCPISNPNKFKDKLKEFIEQIEPLVSNL
>Mature_429_residues
MKLGKFISVLGKSNYVPCNYGQYKNVNYIQEALVRKYKDKISDVIIFATKEAIKSNWLGEGSLKNKFDGLQEQGIEFNYK
IKEIPLGASEDEVWEIFDIIVEEINEGDSLYLDITHGFRFQPMLIMSIMNYVKLIKNVTVESIEYGMFEILGTRQEVEII
PVEERNAPIVDLTLLDQLNDWVVATDSFLTTGSVTKIDELTKNEIGQVLALTKGRNEFFQNLKSLVNNLKDFYDCVNTSR
GNKLNETIINILKNLKDLDEFNQVNDLKNKRIKPFLQIIDKIYDKFKGFSSKDKSDIANYFMVLNWCNENNFIQQGLVIL
RENIISFIIFNMGYDYTINDYRFDVSKALSYLDGRKKREIYKNKEFYLKVKEFISNNYPYLPKLFSEVGDTRNDISHFGL
TKCPISNPNKFKDKLKEFIEQIEPLVSNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013383
- InterPro:   IPR011742 [H]

Pfam domain/function: PF09530 Cas_TM1812 [H]

EC number: NA

Molecular weight: Translated: 49941; Mature: 49941

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGKFISVLGKSNYVPCNYGQYKNVNYIQEALVRKYKDKISDVIIFATKEAIKSNWLGE
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCCC
GSLKNKFDGLQEQGIEFNYKIKEIPLGASEDEVWEIFDIIVEEINEGDSLYLDITHGFRF
CCCHHHHCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
QPMLIMSIMNYVKLIKNVTVESIEYGMFEILGTRQEVEIIPVEERNAPIVDLTLLDQLND
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHCCC
WVVATDSFLTTGSVTKIDELTKNEIGQVLALTKGRNEFFQNLKSLVNNLKDFYDCVNTSR
CEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GNKLNETIINILKNLKDLDEFNQVNDLKNKRIKPFLQIIDKIYDKFKGFSSKDKSDIANY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FMVLNWCNENNFIQQGLVILRENIISFIIFNMGYDYTINDYRFDVSKALSYLDGRKKREI
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHH
YKNKEFYLKVKEFISNNYPYLPKLFSEVGDTRNDISHFGLTKCPISNPNKFKDKLKEFIE
HCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
QIEPLVSNL
HHHHHHHCC
>Mature Secondary Structure
MKLGKFISVLGKSNYVPCNYGQYKNVNYIQEALVRKYKDKISDVIIFATKEAIKSNWLGE
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCCC
GSLKNKFDGLQEQGIEFNYKIKEIPLGASEDEVWEIFDIIVEEINEGDSLYLDITHGFRF
CCCHHHHCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
QPMLIMSIMNYVKLIKNVTVESIEYGMFEILGTRQEVEIIPVEERNAPIVDLTLLDQLND
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHCCC
WVVATDSFLTTGSVTKIDELTKNEIGQVLALTKGRNEFFQNLKSLVNNLKDFYDCVNTSR
CEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GNKLNETIINILKNLKDLDEFNQVNDLKNKRIKPFLQIIDKIYDKFKGFSSKDKSDIANY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FMVLNWCNENNFIQQGLVILRENIISFIIFNMGYDYTINDYRFDVSKALSYLDGRKKREI
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCHHHHHH
YKNKEFYLKVKEFISNNYPYLPKLFSEVGDTRNDISHFGLTKCPISNPNKFKDKLKEFIE
HCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
QIEPLVSNL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]