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The map label for this gene is 220932223

Identifier: 220932223

GI number: 220932223

Start: 1476813

End: 1477430

Strand: Reverse

Name: 220932223

Synonym: Hore_13850

Alternate gene names: NA

Gene position: 1477430-1476813 (Counterclockwise)

Preceding gene: 220932224

Following gene: 220932222

Centisome position: 57.31

GC content: 28.16

Gene sequence:

>618_bases
ATGAATATTAAAGATCACATAAATTGTAACCATCTTTTATGCAGTGATATTAATTCAAATGGATTCTTAGTACCTTCAAA
AGATATTGAGCCAGAGAAAATAAAGATTTTAATGATATCAGAAGTGCCACCAGTTAATAGAGAAGATTACTTTTATTTTT
CCGATGAATCTGACTACATGAAGACAACAATACAGGCTTTTAAAGATTCTGGAATAACAATAGATAGTATAAATGATTTA
ATTGACTTAGGAGTATATGTTACAACCGCAGTTAAGTGTCCAAAGCTTCAATATCGGATATCAGCTAAGACTATAAAAAA
GTGTTCAGAAATTCTAGAACAAGAAATAAATTATTTTTCAAATGTACAAGTATATCTTCTAATGGGTGATGTAGCTATAA
AGGCAATGAATTACATATGGAAGAGAAAGACTGGCAAAAAGATAATTCCAAACGGATCCACTTATAAGATAAGAAATAGT
GAATATTATTATGAAGGAAAAAAAGTAATCCCTTCGTATTTACAAACAGGGAAAAATTATCTTATTGAGAAAACAAAAAG
AAAGATGATATCAGAAGATATCAAAAAAGCATTTGATTTTGTGAATAATAAGGGATAA

Upstream 100 bases:

>100_bases
ACATCGTACCAGGCCCAGGGGGCCCAGGCACGTCGGGAACACTGGGGACGTTATGTGACATTTTTGCCGTTTGCTTATTA
TGTAAGGAAAGGAGAAAATA

Downstream 100 bases:

>100_bases
ATTATGCAAAAACGTCACATAACAAGGCATTTCCGCTTACTGAGAGAGGAAATAAAGTATTATCGTCCGTTGCCTAAAGG
ACATGCCCTCTGTCACAAAG

Product: uracil-DNA glycosylase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNIKDHINCNHLLCSDINSNGFLVPSKDIEPEKIKILMISEVPPVNREDYFYFSDESDYMKTTIQAFKDSGITIDSINDL
IDLGVYVTTAVKCPKLQYRISAKTIKKCSEILEQEINYFSNVQVYLLMGDVAIKAMNYIWKRKTGKKIIPNGSTYKIRNS
EYYYEGKKVIPSYLQTGKNYLIEKTKRKMISEDIKKAFDFVNNKG

Sequences:

>Translated_205_residues
MNIKDHINCNHLLCSDINSNGFLVPSKDIEPEKIKILMISEVPPVNREDYFYFSDESDYMKTTIQAFKDSGITIDSINDL
IDLGVYVTTAVKCPKLQYRISAKTIKKCSEILEQEINYFSNVQVYLLMGDVAIKAMNYIWKRKTGKKIIPNGSTYKIRNS
EYYYEGKKVIPSYLQTGKNYLIEKTKRKMISEDIKKAFDFVNNKG
>Mature_205_residues
MNIKDHINCNHLLCSDINSNGFLVPSKDIEPEKIKILMISEVPPVNREDYFYFSDESDYMKTTIQAFKDSGITIDSINDL
IDLGVYVTTAVKCPKLQYRISAKTIKKCSEILEQEINYFSNVQVYLLMGDVAIKAMNYIWKRKTGKKIIPNGSTYKIRNS
EYYYEGKKVIPSYLQTGKNYLIEKTKRKMISEDIKKAFDFVNNKG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23719; Mature: 23719

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKDHINCNHLLCSDINSNGFLVPSKDIEPEKIKILMISEVPPVNREDYFYFSDESDYM
CCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCHHH
KTTIQAFKDSGITIDSINDLIDLGVYVTTAVKCPKLQYRISAKTIKKCSEILEQEINYFS
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHC
NVQVYLLMGDVAIKAMNYIWKRKTGKKIIPNGSTYKIRNSEYYYEGKKVIPSYLQTGKNY
CCEEEEEEHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCEEEECCCHHHHHHHHCCHHH
LIEKTKRKMISEDIKKAFDFVNNKG
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIKDHINCNHLLCSDINSNGFLVPSKDIEPEKIKILMISEVPPVNREDYFYFSDESDYM
CCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCHHH
KTTIQAFKDSGITIDSINDLIDLGVYVTTAVKCPKLQYRISAKTIKKCSEILEQEINYFS
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHC
NVQVYLLMGDVAIKAMNYIWKRKTGKKIIPNGSTYKIRNSEYYYEGKKVIPSYLQTGKNY
CCEEEEEEHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCEEEECCCHHHHHHHHCCHHH
LIEKTKRKMISEDIKKAFDFVNNKG
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA