Click here to switch to the map view.

The map label for this gene is rsgA2 [H]

Identifier: 220932188

GI number: 220932188

Start: 1447570

End: 1448673

Strand: Reverse

Name: rsgA2 [H]

Synonym: Hore_13510

Alternate gene names: 220932188

Gene position: 1448673-1447570 (Counterclockwise)

Preceding gene: 220932189

Following gene: 220932187

Centisome position: 56.19

GC content: 32.7

Gene sequence:

>1104_bases
ATGAATTGGAATAATGTAAAAACGAGGGAGACCAGGACCATAATAATAAACAGGGAGGAAAATACATTGAATTTAGTGGA
TTTAGGTTGGAATCAAGATTTTGAAAGTAAATTTAACCAAATTAATAATAAAGAAAATTATCAAGTAGCTAGAGTTGCTG
TAGAGTATAAGGGGATCTATAAGTTGTATACTGAAGCAGGAGAAGTATTAGGAGAGATTACAGGAAAGATGCGTTATAAC
AATAAATTTCCTGTGGTAGGTGATTGGGTAATTGCAGATTTACAAAGTGGAGGGAAGCGAGCTATAATCCATGATATCTT
GCCTAGAAAGAGTAAGTTTTCTAGAAATAGAGCTGGAAGTAAAACTCAAGAACAGATAGTAGCTTCTAATATTGATACTA
TTTTTATAGTTACTTCTTTAAATCAAGATTTTAATTTAAGGAGAATAGAAAGATATTTGACAATTGCCTGGGATAGTGGT
GCTAATCCTGTTGTAATTTTAAACAAGGCTGATTTATGTGATGAGATTGAAGTTAGAAAAAGTGAAGTGGAATCTATTGC
TTTTGGGGTACCAATTTATGTAATTGCTGCTTTAGAAAATGAAGGTGTTGATCAGTTAAAAAGATATTTTAAGAGAGGAG
AAACTGTTGCTTTATTAGGTTCTTCAGGAGTAGGAAAGTCTACTTTGATTAATAGCCTACTTGGTAAGGAAAAGATGAAG
GTTAATAATGTTAGAGAAGATGATGGAAAGGGAAGACATACTACTACTCGTAGAGAGATGATACTTTTAGATGAAGGGGG
AATAATTATTGATACTCCAGGAATGAGAGAAATTCAATTGTGGGATGTTTCTGAAGGAATAGGTAATAGCTTTTCAGATA
TAGAAAAATTGGCTCAGGATTGTTATTTTAATGATTGTCAGCATGAATCTGAGCCTAAATGTGCAGTTAAGAAAGCTATT
GAAGAAGGTATAATTACAGAGGAAAGGTTTAATAGTTACAAGAAGCTCCAACGGGAAAGGAAATATATTGAGATTAAAAA
GGAACGGGGAGCTAATGCAATGGAAAAATACAAATGGGATATAATTATGGGAGAAGAATCTTAA

Upstream 100 bases:

>100_bases
GCAATTCATACTGCGTAGAAGCAATTAATAAACCTGAATATTGGTAATAGTTAACGTCTGTAATTAAAAAGGGAGATGAT
TTAAATAGTGGATACAGAAA

Downstream 100 bases:

>100_bases
TGTACCAGTTTTTTGGGGATGTTTTACAATACTAGAAGAGTAGATGTTGGTAGATTTAAGATGATTAAAGCTAATAAATA
TTTTGATGTATAATTATGGT

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNWNNVKTRETRTIIINREENTLNLVDLGWNQDFESKFNQINNKENYQVARVAVEYKGIYKLYTEAGEVLGEITGKMRYN
NKFPVVGDWVIADLQSGGKRAIIHDILPRKSKFSRNRAGSKTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLTIAWDSG
ANPVVILNKADLCDEIEVRKSEVESIAFGVPIYVIAALENEGVDQLKRYFKRGETVALLGSSGVGKSTLINSLLGKEKMK
VNNVREDDGKGRHTTTRREMILLDEGGIIIDTPGMREIQLWDVSEGIGNSFSDIEKLAQDCYFNDCQHESEPKCAVKKAI
EEGIITEERFNSYKKLQRERKYIEIKKERGANAMEKYKWDIIMGEES

Sequences:

>Translated_367_residues
MNWNNVKTRETRTIIINREENTLNLVDLGWNQDFESKFNQINNKENYQVARVAVEYKGIYKLYTEAGEVLGEITGKMRYN
NKFPVVGDWVIADLQSGGKRAIIHDILPRKSKFSRNRAGSKTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLTIAWDSG
ANPVVILNKADLCDEIEVRKSEVESIAFGVPIYVIAALENEGVDQLKRYFKRGETVALLGSSGVGKSTLINSLLGKEKMK
VNNVREDDGKGRHTTTRREMILLDEGGIIIDTPGMREIQLWDVSEGIGNSFSDIEKLAQDCYFNDCQHESEPKCAVKKAI
EEGIITEERFNSYKKLQRERKYIEIKKERGANAMEKYKWDIIMGEES
>Mature_367_residues
MNWNNVKTRETRTIIINREENTLNLVDLGWNQDFESKFNQINNKENYQVARVAVEYKGIYKLYTEAGEVLGEITGKMRYN
NKFPVVGDWVIADLQSGGKRAIIHDILPRKSKFSRNRAGSKTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLTIAWDSG
ANPVVILNKADLCDEIEVRKSEVESIAFGVPIYVIAALENEGVDQLKRYFKRGETVALLGSSGVGKSTLINSLLGKEKMK
VNNVREDDGKGRHTTTRREMILLDEGGIIIDTPGMREIQLWDVSEGIGNSFSDIEKLAQDCYFNDCQHESEPKCAVKKAI
EEGIITEERFNSYKKLQRERKYIEIKKERGANAMEKYKWDIIMGEES

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=234, Percent_Identity=32.4786324786325, Blast_Score=138, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 41977; Mature: 41977

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWNNVKTRETRTIIINREENTLNLVDLGWNQDFESKFNQINNKENYQVARVAVEYKGIY
CCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEHHHHHH
KLYTEAGEVLGEITGKMRYNNKFPVVGDWVIADLQSGGKRAIIHDILPRKSKFSRNRAGS
HHHHHHHHHHHHHHCCEEECCCCCEEEHHHEEEHHCCCCEEEHHHHCCCHHHHHHCCCCC
KTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLTIAWDSGANPVVILNKADLCDEIEVRK
HHHHHHHHCCCCEEEEEEECCCCCCHHEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHH
SEVESIAFGVPIYVIAALENEGVDQLKRYFKRGETVALLGSSGVGKSTLINSLLGKEKMK
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHH
VNNVREDDGKGRHTTTRREMILLDEGGIIIDTPGMREIQLWDVSEGIGNSFSDIEKLAQD
HCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH
CYFNDCQHESEPKCAVKKAIEEGIITEERFNSYKKLQRERKYIEIKKERGANAMEKYKWD
HCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEHHCCCCHHHHEEEE
IIMGEES
EEECCCC
>Mature Secondary Structure
MNWNNVKTRETRTIIINREENTLNLVDLGWNQDFESKFNQINNKENYQVARVAVEYKGIY
CCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEHHHHHH
KLYTEAGEVLGEITGKMRYNNKFPVVGDWVIADLQSGGKRAIIHDILPRKSKFSRNRAGS
HHHHHHHHHHHHHHCCEEECCCCCEEEHHHEEEHHCCCCEEEHHHHCCCHHHHHHCCCCC
KTQEQIVASNIDTIFIVTSLNQDFNLRRIERYLTIAWDSGANPVVILNKADLCDEIEVRK
HHHHHHHHCCCCEEEEEEECCCCCCHHEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHH
SEVESIAFGVPIYVIAALENEGVDQLKRYFKRGETVALLGSSGVGKSTLINSLLGKEKMK
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHH
VNNVREDDGKGRHTTTRREMILLDEGGIIIDTPGMREIQLWDVSEGIGNSFSDIEKLAQD
HCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH
CYFNDCQHESEPKCAVKKAIEEGIITEERFNSYKKLQRERKYIEIKKERGANAMEKYKWD
HCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEHHCCCCHHHHEEEE
IIMGEES
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]