Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932168

Identifier: 220932168

GI number: 220932168

Start: 1430192

End: 1430836

Strand: Reverse

Name: 220932168

Synonym: Hore_13310

Alternate gene names: NA

Gene position: 1430836-1430192 (Counterclockwise)

Preceding gene: 220932169

Following gene: 220932164

Centisome position: 55.5

GC content: 39.22

Gene sequence:

>645_bases
ATGTCAGTTGGGGCACTTTTTGTATCTGCATTTATTATTGGTTTTTCCGGAGCTATGATGCCAGGACCTTTACTGACTTA
TGTTATCAACGGAAGTTTGAGGAAAGGTTTTAAAGCAGGTCCTCTTTTAATTGTGGGTCACGCCATTTTGGAACTTATAT
TGATTGTGTTATTATTATTGGGGCTTAATAACCTATTTTCAAACCAGATATTTACTTCAGCTCTGGGCCTTATCGGAGGT
AGTATTTTACTCTGGATGGGTTATGGAATGATAAAATCAGTCATAAAAAGGGAAATATCGTTAGAAGGACAGGTTGAAAA
TAAAGTTAACATCGCAGGGTTGGTGTTACCCGGGGCCATTGTTAGTATTTCAAATCCTTACTGGGTACTGTGGTGGGCTA
CAGTTGGAATGACTTATCTGGCTAAAAGCCATCAACAGGGAGTCCTGGGAACCGGGGCTTTTTTCACAGGACATATTCTG
GCTGATTTTGTCTGGTATTCATTTATTAGCTGGCTGGTTGTCTTTGGCCGGAAATTGTTAAACGACAGGATGTATAGAGG
GCTGGTAGCCCTGTTCGGGATTATCCTTATTTATTTTGCTTTAATGTTTATGTATGACGGGGTTAAATTTTTTATTTTTT
CGTGA

Upstream 100 bases:

>100_bases
GAGGGTGAAAAAATTATCGATGAACTAATGGTAGTTTTTTCTAAATTTACAGATTAAAGTTTTTCTTAAAATTTAAATAC
AAAGGCAGGGTGATAGTTAT

Downstream 100 bases:

>100_bases
TAAAAACCCCCTGGAAGATACCACTGGAGCTGTGGTTAACTTACAGGGGGTTTTAGTTTATTATATTTGTTTTTAGTTAA
ACAGGAAGGGGCAGACCGGA

Product: lysine exporter LysE/YggA

Products: NA

Alternate protein names: Lysine Exporter Protein LysE/YggA; Transporter Protein; Translocator Protein LysE Family; Lysine Efflux Protein; LysE Family Translocator Protein; Threonine Efflux Protein

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSVGALFVSAFIIGFSGAMMPGPLLTYVINGSLRKGFKAGPLLIVGHAILELILIVLLLLGLNNLFSNQIFTSALGLIGG
SILLWMGYGMIKSVIKREISLEGQVENKVNIAGLVLPGAIVSISNPYWVLWWATVGMTYLAKSHQQGVLGTGAFFTGHIL
ADFVWYSFISWLVVFGRKLLNDRMYRGLVALFGIILIYFALMFMYDGVKFFIFS

Sequences:

>Translated_214_residues
MSVGALFVSAFIIGFSGAMMPGPLLTYVINGSLRKGFKAGPLLIVGHAILELILIVLLLLGLNNLFSNQIFTSALGLIGG
SILLWMGYGMIKSVIKREISLEGQVENKVNIAGLVLPGAIVSISNPYWVLWWATVGMTYLAKSHQQGVLGTGAFFTGHIL
ADFVWYSFISWLVVFGRKLLNDRMYRGLVALFGIILIYFALMFMYDGVKFFIFS
>Mature_213_residues
SVGALFVSAFIIGFSGAMMPGPLLTYVINGSLRKGFKAGPLLIVGHAILELILIVLLLLGLNNLFSNQIFTSALGLIGGS
ILLWMGYGMIKSVIKREISLEGQVENKVNIAGLVLPGAIVSISNPYWVLWWATVGMTYLAKSHQQGVLGTGAFFTGHILA
DFVWYSFISWLVVFGRKLLNDRMYRGLVALFGIILIYFALMFMYDGVKFFIFS

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23514; Mature: 23382

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGALFVSAFIIGFSGAMMPGPLLTYVINGSLRKGFKAGPLLIVGHAILELILIVLLLL
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GLNNLFSNQIFTSALGLIGGSILLWMGYGMIKSVIKREISLEGQVENKVNIAGLVLPGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHH
VSISNPYWVLWWATVGMTYLAKSHQQGVLGTGAFFTGHILADFVWYSFISWLVVFGRKLL
EEECCCEEEEHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDRMYRGLVALFGIILIYFALMFMYDGVKFFIFS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
SVGALFVSAFIIGFSGAMMPGPLLTYVINGSLRKGFKAGPLLIVGHAILELILIVLLLL
CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GLNNLFSNQIFTSALGLIGGSILLWMGYGMIKSVIKREISLEGQVENKVNIAGLVLPGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHH
VSISNPYWVLWWATVGMTYLAKSHQQGVLGTGAFFTGHILADFVWYSFISWLVVFGRKLL
EEECCCEEEEHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDRMYRGLVALFGIILIYFALMFMYDGVKFFIFS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA