| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932160
Identifier: 220932160
GI number: 220932160
Start: 1422381
End: 1423361
Strand: Reverse
Name: 220932160
Synonym: Hore_13230
Alternate gene names: NA
Gene position: 1423361-1422381 (Counterclockwise)
Preceding gene: 220932161
Following gene: 220932159
Centisome position: 55.21
GC content: 38.23
Gene sequence:
>981_bases ATGAATATTAAATATTTGTTCTGGAATGGGGAAGAAAACAGGGTCCGGTCGTTATGGCGTGTTCTCATTCAGTTGTTGCT AACCCTGTTTTTAATTTTTGTTATTTCAACGATTGTTGTTAATCTTCTTATCATGGCAGGTATTTCCCCAAAGTTTATGA ATACTGCCCCTGGTGATACAATCATTTATTTTTTTACTCTTGTTAGTACTGTACTCTCAGTCTGGTTTGTGGGAACTAAA TTAGATAAAAGGCCTTTTTATGAATTTGGGTTTGATATCAATAAAGACTGGTGGCTGGATTTTATTTTTGGATTTGTGCT GGGAATTTTTTTAATGGGTATTATATTTATAATAGAACTTAAAGCCGGCTGGATAGAAATTAAAAACTCTGTTTTTCAGG GGATAGGTTCGGGAACCAGTGCCAGTGTTTTAACCGGTATTTTCTTGAATTTAATTTTTTTTATAATGGTTGGTATAGAA GAAGAACTTTTATCCCGAGGTTATCAATTATTAAACCTTAGTGAGGGTTTCAATTACAAAAAATCCCATCCGGTAGGTGC CATTATTCTTGCTACCCTTGTTACCTCTGGTTTTTTCAGTATTCTTCATGCTGGCAATCCCAATGTTACCGCAGTTAGTT TAATAAACATTTTCCTGGCAGGTATTTTCCTGGCAACCGGATTTGTTCTTACCGGTCAGCTGGCCATACCGATTGGTTTA CATATTAGCTGGAATTTTTTTCAGGGAAATGTATTTGGTTTTCCGGTCAGTGGGATGAACAGGCAGGCCAGTCTCATTAC CATTCAGCAAAAAGGGCCAGAGTTATGGACCGGAGGGGCATTTGGTCCAGAAGCTGGTTTGCTCGGGGTACTGGCTACTT TGCTGGGGATTTTACTTATAGTTGGCTGGGTGGTTTTCCGTTATAAAAAAGCAGGTATTTGTACCGGGTTGGCAGAGTAT AACCATATTAAGGAGGTGTAA
Upstream 100 bases:
>100_bases GATAGGGAAGAGCCCGGAATATTAAAGGAACTTTTACGGCCATACCCCGGGGAGGAAATAGAGGTAGTTAGATAATTTTT TAAAAGGGAGTGGTCTTACT
Downstream 100 bases:
>100_bases AATGTCCGGTATTGTATTTTTTAAGACAACCAGGCTGGAAGAAATAAAAAAATTTTACCAGGATAGAATAGGTATGGACC TCTGGTTAGATCAGGGGCAA
Product: abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; Protease; Protease CAAX Amino Terminal Family; Ypothetical Protein SMU.; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family; CAAX Amino Terminal Protease; CAAX-Like Membrane Endopeptidase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MNIKYLFWNGEENRVRSLWRVLIQLLLTLFLIFVISTIVVNLLIMAGISPKFMNTAPGDTIIYFFTLVSTVLSVWFVGTK LDKRPFYEFGFDINKDWWLDFIFGFVLGIFLMGIIFIIELKAGWIEIKNSVFQGIGSGTSASVLTGIFLNLIFFIMVGIE EELLSRGYQLLNLSEGFNYKKSHPVGAIILATLVTSGFFSILHAGNPNVTAVSLINIFLAGIFLATGFVLTGQLAIPIGL HISWNFFQGNVFGFPVSGMNRQASLITIQQKGPELWTGGAFGPEAGLLGVLATLLGILLIVGWVVFRYKKAGICTGLAEY NHIKEV
Sequences:
>Translated_326_residues MNIKYLFWNGEENRVRSLWRVLIQLLLTLFLIFVISTIVVNLLIMAGISPKFMNTAPGDTIIYFFTLVSTVLSVWFVGTK LDKRPFYEFGFDINKDWWLDFIFGFVLGIFLMGIIFIIELKAGWIEIKNSVFQGIGSGTSASVLTGIFLNLIFFIMVGIE EELLSRGYQLLNLSEGFNYKKSHPVGAIILATLVTSGFFSILHAGNPNVTAVSLINIFLAGIFLATGFVLTGQLAIPIGL HISWNFFQGNVFGFPVSGMNRQASLITIQQKGPELWTGGAFGPEAGLLGVLATLLGILLIVGWVVFRYKKAGICTGLAEY NHIKEV >Mature_326_residues MNIKYLFWNGEENRVRSLWRVLIQLLLTLFLIFVISTIVVNLLIMAGISPKFMNTAPGDTIIYFFTLVSTVLSVWFVGTK LDKRPFYEFGFDINKDWWLDFIFGFVLGIFLMGIIFIIELKAGWIEIKNSVFQGIGSGTSASVLTGIFLNLIFFIMVGIE EELLSRGYQLLNLSEGFNYKKSHPVGAIILATLVTSGFFSILHAGNPNVTAVSLINIFLAGIFLATGFVLTGQLAIPIGL HISWNFFQGNVFGFPVSGMNRQASLITIQQKGPELWTGGAFGPEAGLLGVLATLLGILLIVGWVVFRYKKAGICTGLAEY NHIKEV
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36097; Mature: 36097
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKYLFWNGEENRVRSLWRVLIQLLLTLFLIFVISTIVVNLLIMAGISPKFMNTAPGDT CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCH IIYFFTLVSTVLSVWFVGTKLDKRPFYEFGFDINKDWWLDFIFGFVLGIFLMGIIFIIEL HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAGWIEIKNSVFQGIGSGTSASVLTGIFLNLIFFIMVGIEEELLSRGYQLLNLSEGFNYK CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHEEECCCCCCCC KSHPVGAIILATLVTSGFFSILHAGNPNVTAVSLINIFLAGIFLATGFVLTGQLAIPIGL CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE HISWNFFQGNVFGFPVSGMNRQASLITIQQKGPELWTGGAFGPEAGLLGVLATLLGILLI EEEEEEEECCEEEECCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHH VGWVVFRYKKAGICTGLAEYNHIKEV HHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MNIKYLFWNGEENRVRSLWRVLIQLLLTLFLIFVISTIVVNLLIMAGISPKFMNTAPGDT CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCH IIYFFTLVSTVLSVWFVGTKLDKRPFYEFGFDINKDWWLDFIFGFVLGIFLMGIIFIIEL HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAGWIEIKNSVFQGIGSGTSASVLTGIFLNLIFFIMVGIEEELLSRGYQLLNLSEGFNYK CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHEEECCCCCCCC KSHPVGAIILATLVTSGFFSILHAGNPNVTAVSLINIFLAGIFLATGFVLTGQLAIPIGL CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE HISWNFFQGNVFGFPVSGMNRQASLITIQQKGPELWTGGAFGPEAGLLGVLATLLGILLI EEEEEEEECCEEEECCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHH VGWVVFRYKKAGICTGLAEYNHIKEV HHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA