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The map label for this gene is spoIV [H]

Identifier: 220932098

GI number: 220932098

Start: 1354728

End: 1355897

Strand: Reverse

Name: spoIV [H]

Synonym: Hore_12610

Alternate gene names: 220932098

Gene position: 1355897-1354728 (Counterclockwise)

Preceding gene: 220932099

Following gene: 220932097

Centisome position: 52.59

GC content: 35.64

Gene sequence:

>1170_bases
TTGCTGAGAAAAATAATGAATTTTATCCAGGGTTATCTTTTAATTGAAATTACCGGGAATGCCTTGGAAAGGTTTATAAA
CCAGATCATTGAAAAGGAAATTATTCTGTGGGATGTTAAGCGTGAAAACAAATCCAGATATCTGGCCAAAATAGATATAA
AGAATTTTAATAAATTAAGACCTCTTGTCAGGAAACGGATGTGCCGGGTCAGGATAATGGATAAATGTGGCCTTCCTTTC
CTTATTACCAGAGCAAAACAGAATTATTTTCTTTTGGTAGGTTTTTTAATATTATTTTTAATACTTTATGTTGGCTCAAA
TTTTTTATTATTTATTGGCATTGAGGGTCTTGAAAAAATACCTGAAGAAAGGATTATTAACATCCTTAAAGAAGAAGGGG
TAAGACCCGGAATTTTAAAAAACAGGGTTAATCCTGAACGGCTGGAAAGCATTATTCTGAAGGAAGAGCCTCGCCTGGCC
TGGGTGGATGTTAAATGGCAGGGAAGCAGGCTTTTTATTGAGACCGTTGAAAAGAAAATAGTAGAAAAAACAGAACCCGG
ACACCTCATTGCAGCTAAAAGTGGAGTGATAAAAGAAATCATTGTTTTAAAGGGAAAAGCGGTTGTTGAAGAAGGAGATA
CGGTATTATCAGGTCAACCTCTTATTATCAAGCGTGATAAAAACGAGAGGGCCCGGGGTATTGTCAGGGCTTATGTCTGG
TATGAGGCAGAAGGTAAGGTCCCTGTAAATTATAAAGAGGTAAAATATACTGGAAAATCTAAAACTATTTATAGATTGAA
GTTTGGAGAATATGGGTTATCAATTCCATGGAATAAACCTGACTGGAAGTCTTACAGGATAAGAAAAGAAATTAAATCTC
TCCCGGAATGGAGGAATCTCAGCATTCCTATAGAATTAATTAGAGAAGAGTACAGGCAGATAAAGTATGTCAAAGGAAAA
AGAAGCTATAAGACGGCGCTTTTTCTGGCTAAAGAAAAAGCCTTAAAAAAAATACTCAGGGAGATAGATTCCGGGACTAT
TATTTTAAATGTTAACTCCCGGGTTATAGAAACCAAAAATGAAAATGTGGTTAAAATTAAATTATTAATCCAGACTGAAG
AAAATATAGCTAAAATTACAGACGAGGAGGGTCCTGGTGGTAGCGACTGA

Upstream 100 bases:

>100_bases
CGGACAGGATCTTGTTATTGAAGAAATACAGACCGATCACTTATCCCTGTCGGGAAAATTAACCGGGCTAAACTACGAGC
AGGGGTAGGGGGCGTTAACT

Downstream 100 bases:

>100_bases
AAAAGAATTTGAAATTAATAATTACCAGTTATTAAGAAATATGGTAGGTAACAAGGACAATAATTTAAAATTAATAGAGG
ACAGGACAGGTGTTCAGTTA

Product: putative stage IV sporulation YqfD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MLRKIMNFIQGYLLIEITGNALERFINQIIEKEIILWDVKRENKSRYLAKIDIKNFNKLRPLVRKRMCRVRIMDKCGLPF
LITRAKQNYFLLVGFLILFLILYVGSNFLLFIGIEGLEKIPEERIINILKEEGVRPGILKNRVNPERLESIILKEEPRLA
WVDVKWQGSRLFIETVEKKIVEKTEPGHLIAAKSGVIKEIIVLKGKAVVEEGDTVLSGQPLIIKRDKNERARGIVRAYVW
YEAEGKVPVNYKEVKYTGKSKTIYRLKFGEYGLSIPWNKPDWKSYRIRKEIKSLPEWRNLSIPIELIREEYRQIKYVKGK
RSYKTALFLAKEKALKKILREIDSGTIILNVNSRVIETKNENVVKIKLLIQTEENIAKITDEEGPGGSD

Sequences:

>Translated_389_residues
MLRKIMNFIQGYLLIEITGNALERFINQIIEKEIILWDVKRENKSRYLAKIDIKNFNKLRPLVRKRMCRVRIMDKCGLPF
LITRAKQNYFLLVGFLILFLILYVGSNFLLFIGIEGLEKIPEERIINILKEEGVRPGILKNRVNPERLESIILKEEPRLA
WVDVKWQGSRLFIETVEKKIVEKTEPGHLIAAKSGVIKEIIVLKGKAVVEEGDTVLSGQPLIIKRDKNERARGIVRAYVW
YEAEGKVPVNYKEVKYTGKSKTIYRLKFGEYGLSIPWNKPDWKSYRIRKEIKSLPEWRNLSIPIELIREEYRQIKYVKGK
RSYKTALFLAKEKALKKILREIDSGTIILNVNSRVIETKNENVVKIKLLIQTEENIAKITDEEGPGGSD
>Mature_389_residues
MLRKIMNFIQGYLLIEITGNALERFINQIIEKEIILWDVKRENKSRYLAKIDIKNFNKLRPLVRKRMCRVRIMDKCGLPF
LITRAKQNYFLLVGFLILFLILYVGSNFLLFIGIEGLEKIPEERIINILKEEGVRPGILKNRVNPERLESIILKEEPRLA
WVDVKWQGSRLFIETVEKKIVEKTEPGHLIAAKSGVIKEIIVLKGKAVVEEGDTVLSGQPLIIKRDKNERARGIVRAYVW
YEAEGKVPVNYKEVKYTGKSKTIYRLKFGEYGLSIPWNKPDWKSYRIRKEIKSLPEWRNLSIPIELIREEYRQIKYVKGK
RSYKTALFLAKEKALKKILREIDSGTIILNVNSRVIETKNENVVKIKLLIQTEENIAKITDEEGPGGSD

Specific function: May have a role in completing stage IV of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis YqfD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010690 [H]

Pfam domain/function: PF06898 YqfD [H]

EC number: NA

Molecular weight: Translated: 45336; Mature: 45336

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKIMNFIQGYLLIEITGNALERFINQIIEKEIILWDVKRENKSRYLAKIDIKNFNKLR
CHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCHHHH
PLVRKRMCRVRIMDKCGLPFLITRAKQNYFLLVGFLILFLILYVGSNFLLFIGIEGLEKI
HHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCEEEEEECCHHHHC
PEERIINILKEEGVRPGILKNRVNPERLESIILKEEPRLAWVDVKWQGSRLFIETVEKKI
CHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEHHHHHHHHH
VEKTEPGHLIAAKSGVIKEIIVLKGKAVVEEGDTVLSGQPLIIKRDKNERARGIVRAYVW
HHCCCCCEEEEECCCHHHHHHHHCCCEEEECCCEEECCCCEEEECCCCCHHHHEEEEEEE
YEAEGKVPVNYKEVKYTGKSKTIYRLKFGEYGLSIPWNKPDWKSYRIRKEIKSLPEWRNL
EECCCCCCCCHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
SIPIELIREEYRQIKYVKGKRSYKTALFLAKEKALKKILREIDSGTIILNVNSRVIETKN
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCC
ENVVKIKLLIQTEENIAKITDEEGPGGSD
CCEEEEEEEEECCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MLRKIMNFIQGYLLIEITGNALERFINQIIEKEIILWDVKRENKSRYLAKIDIKNFNKLR
CHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCHHHH
PLVRKRMCRVRIMDKCGLPFLITRAKQNYFLLVGFLILFLILYVGSNFLLFIGIEGLEKI
HHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCEEEEEECCHHHHC
PEERIINILKEEGVRPGILKNRVNPERLESIILKEEPRLAWVDVKWQGSRLFIETVEKKI
CHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEHHHHHHHHH
VEKTEPGHLIAAKSGVIKEIIVLKGKAVVEEGDTVLSGQPLIIKRDKNERARGIVRAYVW
HHCCCCCEEEEECCCHHHHHHHHCCCEEEECCCEEECCCCEEEECCCCCHHHHEEEEEEE
YEAEGKVPVNYKEVKYTGKSKTIYRLKFGEYGLSIPWNKPDWKSYRIRKEIKSLPEWRNL
EECCCCCCCCHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
SIPIELIREEYRQIKYVKGKRSYKTALFLAKEKALKKILREIDSGTIILNVNSRVIETKN
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCC
ENVVKIKLLIQTEENIAKITDEEGPGGSD
CCEEEEEEEEECCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7764969 [H]