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The map label for this gene is trkA [H]

Identifier: 220932001

GI number: 220932001

Start: 1254627

End: 1255250

Strand: Reverse

Name: trkA [H]

Synonym: Hore_11630

Alternate gene names: 220932001

Gene position: 1255250-1254627 (Counterclockwise)

Preceding gene: 220932002

Following gene: 220932000

Centisome position: 48.69

GC content: 36.54

Gene sequence:

>624_bases
ATGAAGAATTTCTACCACTTCAGTCTATCTGGAGTGGCTTTTTTTATTAATAAAGATCCCCAGTATTGTAAGGAACTGGC
CCGCAGTCTAAAAGCCAACGTTGTGTATGGGGATGCTTCTGACCCTCAAATTCTTGAAGATGCAGGGGGGTATAAAACTG
ATATACTTGTTGCTTTAACACCTAAAGACCATGATAATCTCTTTATATGTAAAATGGCCCAGAAATATTTTAATGTAGAA
CGGACTACTGCCCTAGTCAATAATCCTGATAATGAATGTTTATTTAAGAAAATAGGTATAACATCTATATTTAATACAAC
CCAATTGTTAAGTTCCTTAATAGAACAACATGTTGCCGTTGAGGATATCAGTAATTTAATTACCCTTGAAGACGGGAAAT
TAAGTGTAGCCCAGATTATTATTCCTGAAAATGCCCCTTCAGTTGGTAAAACAGTAAAAGAATTAGATTTACCGTTAAGT
ATTGTCCTTGGAGGCATAATCAGAAATGGTGATATAGTAATTCCCAGGGGAGGAACAATTATTAAACCAGGTGATAAAGT
TCTGGTTATTTCCCTGCCCCAGGATCAGGCAAAAGCAGTCAAGGCTCTTGGTGGTGAAGAATAA

Upstream 100 bases:

>100_bases
TATGGGGTTAATCCAGTATCAATATAATTATTACTGGAAGGAGACCTTTTACTCCTAACCCGACAGCTAACCTCGTAGGC
GTTAAAAGGACAGATAGATA

Downstream 100 bases:

>100_bases
TGAACTACCTGGATATTCTTAAATTTCGCTACAGATTAATTATTAAGTACACAGGAATTATAGTAATGTTAGTTGGGGTA
TCTATAATAATACCCTTATT

Product: TrkA-C domain-containing protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKNFYHFSLSGVAFFINKDPQYCKELARSLKANVVYGDASDPQILEDAGGYKTDILVALTPKDHDNLFICKMAQKYFNVE
RTTALVNNPDNECLFKKIGITSIFNTTQLLSSLIEQHVAVEDISNLITLEDGKLSVAQIIIPENAPSVGKTVKELDLPLS
IVLGGIIRNGDIVIPRGGTIIKPGDKVLVISLPQDQAKAVKALGGEE

Sequences:

>Translated_207_residues
MKNFYHFSLSGVAFFINKDPQYCKELARSLKANVVYGDASDPQILEDAGGYKTDILVALTPKDHDNLFICKMAQKYFNVE
RTTALVNNPDNECLFKKIGITSIFNTTQLLSSLIEQHVAVEDISNLITLEDGKLSVAQIIIPENAPSVGKTVKELDLPLS
IVLGGIIRNGDIVIPRGGTIIKPGDKVLVISLPQDQAKAVKALGGEE
>Mature_207_residues
MKNFYHFSLSGVAFFINKDPQYCKELARSLKANVVYGDASDPQILEDAGGYKTDILVALTPKDHDNLFICKMAQKYFNVE
RTTALVNNPDNECLFKKIGITSIFNTTQLLSSLIEQHVAVEDISNLITLEDGKLSVAQIIIPENAPSVGKTVKELDLPLS
IVLGGIIRNGDIVIPRGGTIIKPGDKVLVISLPQDQAKAVKALGGEE

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=188, Percent_Identity=25.531914893617, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 22554; Mature: 22554

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFYHFSLSGVAFFINKDPQYCKELARSLKANVVYGDASDPQILEDAGGYKTDILVALT
CCCEEEEEECCEEEEEECCHHHHHHHHHHHHCEEEECCCCCCCHHHHCCCCCEEEEEEEC
PKDHDNLFICKMAQKYFNVERTTALVNNPDNECLFKKIGITSIFNTTQLLSSLIEQHVAV
CCCCCCEEEEEEHHHHHCHHHHEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EDISNLITLEDGKLSVAQIIIPENAPSVGKTVKELDLPLSIVLGGIIRNGDIVIPRGGTI
HHHHCEEEECCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHEECCCCEEEECCCEE
IKPGDKVLVISLPQDQAKAVKALGGEE
ECCCCEEEEEECCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKNFYHFSLSGVAFFINKDPQYCKELARSLKANVVYGDASDPQILEDAGGYKTDILVALT
CCCEEEEEECCEEEEEECCHHHHHHHHHHHHCEEEECCCCCCCHHHHCCCCCEEEEEEEC
PKDHDNLFICKMAQKYFNVERTTALVNNPDNECLFKKIGITSIFNTTQLLSSLIEQHVAV
CCCCCCEEEEEEHHHHHCHHHHEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EDISNLITLEDGKLSVAQIIIPENAPSVGKTVKELDLPLSIVLGGIIRNGDIVIPRGGTI
HHHHCEEEECCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHEECCCCEEEECCCEE
IKPGDKVLVISLPQDQAKAVKALGGEE
ECCCCEEEEEECCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 9784509 [H]