| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is hflX [H]
Identifier: 220931954
GI number: 220931954
Start: 1208267
End: 1209454
Strand: Reverse
Name: hflX [H]
Synonym: Hore_11140
Alternate gene names: 220931954
Gene position: 1209454-1208267 (Counterclockwise)
Preceding gene: 220931964
Following gene: 220931953
Centisome position: 46.91
GC content: 36.53
Gene sequence:
>1188_bases GTGGTTGGTCAGGATGAAATAAGCCTTGAAGAACTAAAGCGACTGGCTGATACTGCTGGAGTAAAAGTATTAAAAAAATT AATGCAGCGTCGTTTTGTTATAAATCCTGCCTTTTATATAGGCAAGGGCAAACTGAAAGAACTAAAACATTTAGTATTTG AAAATGGTGCAAATCTTGTAATATTTGACAATGAACTAACTCCAGCCCAGTTCAGGAATCTCGAAAATTTCCTGGAAACC AGAGTTGTTGATAGAACTCAGTTAATTTTGGATATTTTTGCTCAACATGCCCATACCAGAGAAAGTAAACTCCAGGTTGA ACTCGCCCAGCTTCAATACCTTCTACCGAGACTAACTGGAAAAGGAGAAGAACTATCGAGACTCGGGGGTGGTATTGGTA CCAGGGGCCCCGGGGAAACAAAGTTAGAAATAGACAGACGTCGTATTGAAAAAAGAATATATAAACTCAAACAGGAATTA AAGAATGTAAAAAAGAATCGTCAAATCCAGAGAAAATCAAGAAAAGACCCTGTTGTAGCCCTGGTCGGTTATACAAATGC TGGTAAATCTACCCTGTTAAATACACTAACCAATGCAAATACTGAAGTGGCTGACAAACTATTTGCAACCCTTGATTCTA CATTAAGAAGGTTAACCCTCCCCTTCGGTAAACAGATTATTATTAGTGATACAGTTGGTTTTATAAAAAAATTACCTCAC CAACTGGTAGCTTCATTTCAGGCAACCCTGGAAGAAATCAAAGAAGCTGATATCTTACTTCATGTAGTCGACAGTAGTGA ACCCGAACTTGAAAACCATATTAAGGTTGTCAATGCTGTCTTAAAGGAACTTGGGGTCTTTCATAAAGAAAAAATAATGG TCCTTAACAAGATTGATCGACTAGAAAAAGGTCAATTACTTGACCTTGGTATAAAATATCCACGTGCTGTGCCTGTATCC GCTCTATCGGGTAAATGTATAGATAATCTTATGGGAAAAATATGTGAAATTATGTTAAATGAAATGACAACAGTTCATTT AAAAATTCCTTACCACGAAGCTGGATGGATTAATACAATACATCACCAGGGGTTAGTACTGAAAGAAAAATACGTTAATG ACTCTATTATTATAAAGGCAACAATTCCCACAGAACTGGCAAACCGGTTAAAAAAATATACCTATTAA
Upstream 100 bases:
>100_bases AAAATGGTTGGATATAATTGACTTAGAATATAAAAAGGTGGAGGGATAAAATATTACCGTCACTGAAGATTTAAGGGGAA ATGCATTTACTCTGGCCATT
Downstream 100 bases:
>100_bases ATAAATTCTCATAAACCCGGTAACCATTAAAATTTTAACTTTACTGGGTATTATTATTTAATCATTTACTCTAGAGAAAA TTTTTTTTAAAGTGCATTAT
Product: small GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MVGQDEISLEELKRLADTAGVKVLKKLMQRRFVINPAFYIGKGKLKELKHLVFENGANLVIFDNELTPAQFRNLENFLET RVVDRTQLILDIFAQHAHTRESKLQVELAQLQYLLPRLTGKGEELSRLGGGIGTRGPGETKLEIDRRRIEKRIYKLKQEL KNVKKNRQIQRKSRKDPVVALVGYTNAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPH QLVASFQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFHKEKIMVLNKIDRLEKGQLLDLGIKYPRAVPVS ALSGKCIDNLMGKICEIMLNEMTTVHLKIPYHEAGWINTIHHQGLVLKEKYVNDSIIIKATIPTELANRLKKYTY
Sequences:
>Translated_395_residues MVGQDEISLEELKRLADTAGVKVLKKLMQRRFVINPAFYIGKGKLKELKHLVFENGANLVIFDNELTPAQFRNLENFLET RVVDRTQLILDIFAQHAHTRESKLQVELAQLQYLLPRLTGKGEELSRLGGGIGTRGPGETKLEIDRRRIEKRIYKLKQEL KNVKKNRQIQRKSRKDPVVALVGYTNAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPH QLVASFQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFHKEKIMVLNKIDRLEKGQLLDLGIKYPRAVPVS ALSGKCIDNLMGKICEIMLNEMTTVHLKIPYHEAGWINTIHHQGLVLKEKYVNDSIIIKATIPTELANRLKKYTY >Mature_395_residues MVGQDEISLEELKRLADTAGVKVLKKLMQRRFVINPAFYIGKGKLKELKHLVFENGANLVIFDNELTPAQFRNLENFLET RVVDRTQLILDIFAQHAHTRESKLQVELAQLQYLLPRLTGKGEELSRLGGGIGTRGPGETKLEIDRRRIEKRIYKLKQEL KNVKKNRQIQRKSRKDPVVALVGYTNAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPH QLVASFQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFHKEKIMVLNKIDRLEKGQLLDLGIKYPRAVPVS ALSGKCIDNLMGKICEIMLNEMTTVHLKIPYHEAGWINTIHHQGLVLKEKYVNDSIIIKATIPTELANRLKKYTY
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133116, Length=248, Percent_Identity=33.0645161290323, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI310133118, Length=257, Percent_Identity=33.4630350194552, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI310124269, Length=233, Percent_Identity=34.3347639484979, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI310124267, Length=233, Percent_Identity=34.3347639484979, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI310124171, Length=233, Percent_Identity=34.3347639484979, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI310124169, Length=233, Percent_Identity=34.3347639484979, Blast_Score=125, Evalue=8e-29, Organism=Escherichia coli, GI1790615, Length=396, Percent_Identity=42.4242424242424, Blast_Score=293, Evalue=1e-80, Organism=Caenorhabditis elegans, GI17561038, Length=330, Percent_Identity=30.3030303030303, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24650079, Length=255, Percent_Identity=36.8627450980392, Blast_Score=118, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 44845; Mature: 44845
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGQDEISLEELKRLADTAGVKVLKKLMQRRFVINPAFYIGKGKLKELKHLVFENGANLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEE IFDNELTPAQFRNLENFLETRVVDRTQLILDIFAQHAHTRESKLQVELAQLQYLLPRLTG EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC KGEELSRLGGGIGTRGPGETKLEIDRRRIEKRIYKLKQELKNVKKNRQIQRKSRKDPVVA CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LVGYTNAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPH EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH QLVASFQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFHKEKIMVLNKIDR HHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LEKGQLLDLGIKYPRAVPVSALSGKCIDNLMGKICEIMLNEMTTVHLKIPYHEAGWINTI HCCCCEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHH HHQGLVLKEKYVNDSIIIKATIPTELANRLKKYTY HHCCEEEHHHHCCCEEEEEEECCHHHHHHHHHCCC >Mature Secondary Structure MVGQDEISLEELKRLADTAGVKVLKKLMQRRFVINPAFYIGKGKLKELKHLVFENGANLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCEE IFDNELTPAQFRNLENFLETRVVDRTQLILDIFAQHAHTRESKLQVELAQLQYLLPRLTG EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC KGEELSRLGGGIGTRGPGETKLEIDRRRIEKRIYKLKQELKNVKKNRQIQRKSRKDPVVA CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LVGYTNAGKSTLLNTLTNANTEVADKLFATLDSTLRRLTLPFGKQIIISDTVGFIKKLPH EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH QLVASFQATLEEIKEADILLHVVDSSEPELENHIKVVNAVLKELGVFHKEKIMVLNKIDR HHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LEKGQLLDLGIKYPRAVPVSALSGKCIDNLMGKICEIMLNEMTTVHLKIPYHEAGWINTI HCCCCEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHH HHQGLVLKEKYVNDSIIIKATIPTELANRLKKYTY HHCCEEEHHHHCCCEEEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]