| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931835
Identifier: 220931835
GI number: 220931835
Start: 1082444
End: 1083109
Strand: Direct
Name: 220931835
Synonym: Hore_09920
Alternate gene names: NA
Gene position: 1082444-1083109 (Clockwise)
Preceding gene: 220931834
Following gene: 220931836
Centisome position: 41.99
GC content: 36.34
Gene sequence:
>666_bases ATGCCGTTATTAACAATATTTTTTCTATTTCTCATTATATTCATGGCTCCATACTTAATTTTACCATTATTCCTTTTTAT AGGCCTGCTCTTGCTTTTAATTCCCTTTAAATTTACTCTGGATTCTATTTTTAATCTGATCACAGTTCCTGTACAGCTTT ATCATATCGCTACCAATCCTGTATTACGAAAAAATCACGGGCTGGAACATGCTACAGTTAATGTCCTCGAGAGGGAATTT GGTTATAAAAACCTGGCTGGTTATGCCGAAAATTCAGGTTTTTATATTATTGGGGCTGATAATGTACACCTGGTAGAAGA AGCTGCCCGTCGTGGCCTACGGTTAATGAGGTCTGGTTACAGTGATTTAGCTATTCATCGCAGGTGTGGGACCAGTTTAA CGGTAGCTAATTTTGTATCAGCGGTTATTTTCCTGTTACTTCTGTTTTACACTGGATATTTTAGTCTCTTTTATATAATT ATGGCCATTATTATAGCCAATATTGTAGCTAAACCGTTGGGTATGTTTGTCCAGCAATACTTTACAACTACATCAGATGT AGGGGATATACAGATAGTCAGGGCAGAGTATGTTAATATGGATAATTTCTGGAACCAGCCCGTTAAAATATTTGTCCATA CCCGACAGATACCGTATATTAATTAA
Upstream 100 bases:
>100_bases GAGAGCAGCGGCATTTACCTATGTTGCAGCGACGCTTGTAGCTATTATAAACCTTTTAAGAATATTAATATTATTTGGTA TGGGCAGGGATGAGTAATAG
Downstream 100 bases:
>100_bases ATTTTTAGTTTATAAATATAATAAGGGTTATGTTAGGAGATATTTTTATGTCAATATCAAGAAAAGTAGCAATTAAGGTA TTAATTGAGATTGATAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MPLLTIFFLFLIIFMAPYLILPLFLFIGLLLLLIPFKFTLDSIFNLITVPVQLYHIATNPVLRKNHGLEHATVNVLEREF GYKNLAGYAENSGFYIIGADNVHLVEEAARRGLRLMRSGYSDLAIHRRCGTSLTVANFVSAVIFLLLLFYTGYFSLFYII MAIIIANIVAKPLGMFVQQYFTTTSDVGDIQIVRAEYVNMDNFWNQPVKIFVHTRQIPYIN
Sequences:
>Translated_221_residues MPLLTIFFLFLIIFMAPYLILPLFLFIGLLLLLIPFKFTLDSIFNLITVPVQLYHIATNPVLRKNHGLEHATVNVLEREF GYKNLAGYAENSGFYIIGADNVHLVEEAARRGLRLMRSGYSDLAIHRRCGTSLTVANFVSAVIFLLLLFYTGYFSLFYII MAIIIANIVAKPLGMFVQQYFTTTSDVGDIQIVRAEYVNMDNFWNQPVKIFVHTRQIPYIN >Mature_220_residues PLLTIFFLFLIIFMAPYLILPLFLFIGLLLLLIPFKFTLDSIFNLITVPVQLYHIATNPVLRKNHGLEHATVNVLEREFG YKNLAGYAENSGFYIIGADNVHLVEEAARRGLRLMRSGYSDLAIHRRCGTSLTVANFVSAVIFLLLLFYTGYFSLFYIIM AIIIANIVAKPLGMFVQQYFTTTSDVGDIQIVRAEYVNMDNFWNQPVKIFVHTRQIPYIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25312; Mature: 25181
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLTIFFLFLIIFMAPYLILPLFLFIGLLLLLIPFKFTLDSIFNLITVPVQLYHIATNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC VLRKNHGLEHATVNVLEREFGYKNLAGYAENSGFYIIGADNVHLVEEAARRGLRLMRSGY HHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC SDLAIHRRCGTSLTVANFVSAVIFLLLLFYTGYFSLFYIIMAIIIANIVAKPLGMFVQQY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTTTSDVGDIQIVRAEYVNMDNFWNQPVKIFVHTRQIPYIN HHCCCCCCCEEEHHHHHHCCHHHHCCCEEEEEEECCCCCCC >Mature Secondary Structure PLLTIFFLFLIIFMAPYLILPLFLFIGLLLLLIPFKFTLDSIFNLITVPVQLYHIATNP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC VLRKNHGLEHATVNVLEREFGYKNLAGYAENSGFYIIGADNVHLVEEAARRGLRLMRSGY HHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC SDLAIHRRCGTSLTVANFVSAVIFLLLLFYTGYFSLFYIIMAIIIANIVAKPLGMFVQQY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTTTSDVGDIQIVRAEYVNMDNFWNQPVKIFVHTRQIPYIN HHCCCCCCCEEEHHHHHHCCHHHHCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA