| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931823
Identifier: 220931823
GI number: 220931823
Start: 1070337
End: 1070591
Strand: Direct
Name: 220931823
Synonym: Hore_09800
Alternate gene names: NA
Gene position: 1070337-1070591 (Clockwise)
Preceding gene: 220931822
Following gene: 220931824
Centisome position: 41.52
GC content: 41.57
Gene sequence:
>255_bases TTGAGTGTTAATTTAATTAATATAGGATTTGGAAACATTGTAGCAGGAAACAGGGTAATTGCTGTTGTTAGTCCTGAATC AGCACCTATAAAGAGAATAATCCAGGAAGCCCGGGAGAGGGGTATGCTCATTGATGCTACCTATGGTAGAAGGACCAGGG CTGTCATCATTACAGATAGTGATCATGTTATTCTATCAGCTATTCAACCAGAAACAGTCTCCCACCGTTTAAGCGGGGAA GATGGGAACAGATAG
Upstream 100 bases:
>100_bases TTAGGCATACTGTGGTATTATAAATAAAAGCAAATGAGTAATTTATGTTCCATTTTTATTTACATAAATAACACAAGATG CTAATGAGGGGGATTTAAAA
Downstream 100 bases:
>100_bases GGAGTAGTGAAAGGAGACCTAAAATGGGAAAGGGGAAACTTTTTGTACTGTCAGGTCCTTCTGGTGTAGGTAAAGGGACG GTTTTAGATAAATTATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSVNLINIGFGNIVAGNRVIAVVSPESAPIKRIIQEARERGMLIDATYGRRTRAVIITDSDHVILSAIQPETVSHRLSGE DGNR
Sequences:
>Translated_84_residues MSVNLINIGFGNIVAGNRVIAVVSPESAPIKRIIQEARERGMLIDATYGRRTRAVIITDSDHVILSAIQPETVSHRLSGE DGNR >Mature_83_residues SVNLINIGFGNIVAGNRVIAVVSPESAPIKRIIQEARERGMLIDATYGRRTRAVIITDSDHVILSAIQPETVSHRLSGED GNR
Specific function: Unknown
COG id: COG2052
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0296 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y9800_HALOH (B8CWR7)
Other databases:
- EMBL: CP001098 - RefSeq: YP_002508731.1 - GeneID: 7313473 - GenomeReviews: CP001098_GR - KEGG: hor:Hore_09800 - HOGENOM: HBG286498 - OMA: KRIISDA - HAMAP: MF_01503 - InterPro: IPR007169 - ProDom: PD063023
Pfam domain/function: PF04025 DUF370
EC number: NA
Molecular weight: Translated: 9138; Mature: 9006
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNLINIGFGNIVAGNRVIAVVSPESAPIKRIIQEARERGMLIDATYGRRTRAVIITDS CCEEEEEECCCCEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEEECC DHVILSAIQPETVSHRLSGEDGNR CCEEEEEECCCCCEEEECCCCCCC >Mature Secondary Structure SVNLINIGFGNIVAGNRVIAVVSPESAPIKRIIQEARERGMLIDATYGRRTRAVIITDS CEEEEEECCCCEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEEECC DHVILSAIQPETVSHRLSGEDGNR CCEEEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA