| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931805
Identifier: 220931805
GI number: 220931805
Start: 1040522
End: 1041430
Strand: Direct
Name: 220931805
Synonym: Hore_09620
Alternate gene names: NA
Gene position: 1040522-1041430 (Clockwise)
Preceding gene: 220931804
Following gene: 220931807
Centisome position: 40.36
GC content: 27.17
Gene sequence:
>909_bases GTGGGAGAAGTGAAAAAGAAATATTTCCCATCAAGACTTAAAAGGTTTTTAGCCTTTTTATTAGATATAGTAATTTTATG TTTTATAATATTTATTATAGGAAAATCAGGTAAAAATATATGGATAAGTATTGGTAAGTGGGACTGGATAGTTGGTTTTT TAGTCAGCATAGCTTATTTTGGCTTATTTAACAGTGCTATCGGAAAAGGAAAAACCCCGGGAAAAAGGTTATTTAAAATT AAAGTGGTAAATAAAAAAGGAAGATATTTATCTGTAACCAGGTCTGTTCTGAGAGCTGCTATTCTTTTTTTTCCTTATTT TTTTTCGACTGGATTGATTATTTTACACTACAAAACATTGTTTAGAATATATTTGACAATAATAATAACTATGGTAATTT CTTTATTGTACTTCTTTTTATTCAATAATAAATCACATCAAAGTTTACATGATCTAATATTAAATACTTATGTTGTCAAT GAAAAGGTCAAGGTTGATAAAAAAATTAAAGCTGAATTTAAAAATTATCTGAAACACCTGGCAATAATAACGGTAATAAT ATTTACAGGAATACTTATATACACTTCAACACCAGTATTTTCGGGAATATATCAAGGTATGACCAGTATATACGAAGTCT GTAGTAATGTTAGATATGTCAATTCTTTTATTTATGATGACGAAACCGACACAATTGTCGTAGAGGTATGTTTAAAAGAA AAACCTGAGTCATATAAAGAAATTGCCAGACAGATAGCCCGTTCATTATTTAAGAATAAGTTAGTAATACATGGTCATGA AATTAAAAAAATAAAGATTAAATTGAAATACGGATATAATTTAATCCTCTACAATGAATACATTACCAGGACATTTTACT TTGATAAAGATGAAATTACGGGTAAATAA
Upstream 100 bases:
>100_bases AACCTTTTAATTTACATATAAGAAAAAACAACATATAATAAATATGATAAAGATGCTTGTTATCTTTAATAAATATTATT TTGAAACTGGGAATAAGGAG
Downstream 100 bases:
>100_bases ACACCATAATGGGTTTTATTAGTGTAAATTATTTTACCCCTGTCACTTCATGTGCAGGGGTATTTTTTAATGGAGTTTGT CATCCATTCCCATAGGGCCA
Product: RDD domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGEVKKKYFPSRLKRFLAFLLDIVILCFIIFIIGKSGKNIWISIGKWDWIVGFLVSIAYFGLFNSAIGKGKTPGKRLFKI KVVNKKGRYLSVTRSVLRAAILFFPYFFSTGLIILHYKTLFRIYLTIIITMVISLLYFFLFNNKSHQSLHDLILNTYVVN EKVKVDKKIKAEFKNYLKHLAIITVIIFTGILIYTSTPVFSGIYQGMTSIYEVCSNVRYVNSFIYDDETDTIVVEVCLKE KPESYKEIARQIARSLFKNKLVIHGHEIKKIKIKLKYGYNLILYNEYITRTFYFDKDEITGK
Sequences:
>Translated_302_residues MGEVKKKYFPSRLKRFLAFLLDIVILCFIIFIIGKSGKNIWISIGKWDWIVGFLVSIAYFGLFNSAIGKGKTPGKRLFKI KVVNKKGRYLSVTRSVLRAAILFFPYFFSTGLIILHYKTLFRIYLTIIITMVISLLYFFLFNNKSHQSLHDLILNTYVVN EKVKVDKKIKAEFKNYLKHLAIITVIIFTGILIYTSTPVFSGIYQGMTSIYEVCSNVRYVNSFIYDDETDTIVVEVCLKE KPESYKEIARQIARSLFKNKLVIHGHEIKKIKIKLKYGYNLILYNEYITRTFYFDKDEITGK >Mature_301_residues GEVKKKYFPSRLKRFLAFLLDIVILCFIIFIIGKSGKNIWISIGKWDWIVGFLVSIAYFGLFNSAIGKGKTPGKRLFKIK VVNKKGRYLSVTRSVLRAAILFFPYFFSTGLIILHYKTLFRIYLTIIITMVISLLYFFLFNNKSHQSLHDLILNTYVVNE KVKVDKKIKAEFKNYLKHLAIITVIIFTGILIYTSTPVFSGIYQGMTSIYEVCSNVRYVNSFIYDDETDTIVVEVCLKEK PESYKEIARQIARSLFKNKLVIHGHEIKKIKIKLKYGYNLILYNEYITRTFYFDKDEITGK
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35266; Mature: 35134
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVKKKYFPSRLKRFLAFLLDIVILCFIIFIIGKSGKNIWISIGKWDWIVGFLVSIAYF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH GLFNSAIGKGKTPGKRLFKIKVVNKKGRYLSVTRSVLRAAILFFPYFFSTGLIILHYKTL HHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FRIYLTIIITMVISLLYFFLFNNKSHQSLHDLILNTYVVNEKVKVDKKIKAEFKNYLKHL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AIITVIIFTGILIYTSTPVFSGIYQGMTSIYEVCSNVRYVNSFIYDDETDTIVVEVCLKE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHHC KPESYKEIARQIARSLFKNKLVIHGHEIKKIKIKLKYGYNLILYNEYITRTFYFDKDEIT CCHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEEEEECCEEEEEEHHHHHEEEECCCCCC GK CC >Mature Secondary Structure GEVKKKYFPSRLKRFLAFLLDIVILCFIIFIIGKSGKNIWISIGKWDWIVGFLVSIAYF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH GLFNSAIGKGKTPGKRLFKIKVVNKKGRYLSVTRSVLRAAILFFPYFFSTGLIILHYKTL HHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FRIYLTIIITMVISLLYFFLFNNKSHQSLHDLILNTYVVNEKVKVDKKIKAEFKNYLKHL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AIITVIIFTGILIYTSTPVFSGIYQGMTSIYEVCSNVRYVNSFIYDDETDTIVVEVCLKE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHHC KPESYKEIARQIARSLFKNKLVIHGHEIKKIKIKLKYGYNLILYNEYITRTFYFDKDEIT CCHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEEEEECCEEEEEEHHHHHEEEECCCCCC GK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA