| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqeW [H]
Identifier: 220931717
GI number: 220931717
Start: 940226
End: 941152
Strand: Direct
Name: yqeW [H]
Synonym: Hore_08740
Alternate gene names: 220931717
Gene position: 940226-941152 (Clockwise)
Preceding gene: 220931716
Following gene: 220931718
Centisome position: 36.47
GC content: 35.92
Gene sequence:
>927_bases ATGCTTCTCTTTCTTACCGGGCTTTTCTTTTTTTTAGCTGGCCTTGAAGGTAGTAAAAAGAGCCTGACAAAACTGGCTCT TAAAAGGGTTGAACTTCTTTTAAAAAAGCTGTCTGATAATAATTTGTTAAGTCTGTTAGTTGGGGTTGTTTCTACTGCCA TTCTCCAGAGTAGCAGCGGGTTAACAGTTATAGTCATAAGTCTAATTGAATCTGGCTATCTTGCTTTAAAACCTGCTGTC CTGATTATAATGGGGGCAAATATCGGAACAACCCTGACCGTTCATTTAATATCCCTGCCAATTATAAGTTATTACTCCTG TATAATTATATCAGGTTTGGTTGTTGCAATTATAGGTCTTTTTGTTAATAAAAAAGTTTTCTTTGGAGGATTATCCCTGT TTTGTTTTGGAACTGCTTTTGCCGGTTTGCATTTAATGACAGCATCTTTTGATCTGGCTTCATCCAGGAATATAATCTAT AATTTACTGGCTTTTAGCCGCGGAAATTATCTAAAAGGAATATTGCTGGGAGCTCTTGCTACTGGAATTGTACAGAGTAG TAGTGTTATTACTGCAATTACTGTCAGTCTGGCCCGGGTTAATTTGATTAATCTTTCAGATGCAATAGCTGTAACTCTGG GAAGTAATATTGGAACCTGTATAACTGGTTTTCTGGCCAGTATAAATGCGTCTATTTTCTCAAAACGGCTCGCCTGGGGA CATCTGCTCTTTAACTTTATTGGGGTTTTAGTTTTATTACCGGTTATTAAACCCTTTATTTTTTTGCTTGATAGTACAAA TACCTCCCTGGCCAGACAGGTTGCCAATGCCCATACACTATTTAATATATATAATTTGATTATTTTTTTGCCTTTTTTAA ATACTTTTATAAGTGTGTTGAGGAGGGGATTAAATGGAGATATTTAA
Upstream 100 bases:
>100_bases TTTACCCCGGGTAATGTTATTAAACCCGGCTTGCAATTACAGTCTTAAGAATGATAAAATTTAATTATTGAGCATAGTTA TAGTACTGGGTGAAGTAGCT
Downstream 100 bases:
>100_bases AGTAATATTTTTAGGAATTATTCAGGGATTAACTGAATTTTTACCAATCAGCAGTTCCGGTCATCTGGTCCTTTTTCAGG AACTACTGGGGATTAATACT
Product: Na-cotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MLLFLTGLFFFLAGLEGSKKSLTKLALKRVELLLKKLSDNNLLSLLVGVVSTAILQSSSGLTVIVISLIESGYLALKPAV LIIMGANIGTTLTVHLISLPIISYYSCIIISGLVVAIIGLFVNKKVFFGGLSLFCFGTAFAGLHLMTASFDLASSRNIIY NLLAFSRGNYLKGILLGALATGIVQSSSVITAITVSLARVNLINLSDAIAVTLGSNIGTCITGFLASINASIFSKRLAWG HLLFNFIGVLVLLPVIKPFIFLLDSTNTSLARQVANAHTLFNIYNLIIFLPFLNTFISVLRRGLNGDI
Sequences:
>Translated_308_residues MLLFLTGLFFFLAGLEGSKKSLTKLALKRVELLLKKLSDNNLLSLLVGVVSTAILQSSSGLTVIVISLIESGYLALKPAV LIIMGANIGTTLTVHLISLPIISYYSCIIISGLVVAIIGLFVNKKVFFGGLSLFCFGTAFAGLHLMTASFDLASSRNIIY NLLAFSRGNYLKGILLGALATGIVQSSSVITAITVSLARVNLINLSDAIAVTLGSNIGTCITGFLASINASIFSKRLAWG HLLFNFIGVLVLLPVIKPFIFLLDSTNTSLARQVANAHTLFNIYNLIIFLPFLNTFISVLRRGLNGDI >Mature_308_residues MLLFLTGLFFFLAGLEGSKKSLTKLALKRVELLLKKLSDNNLLSLLVGVVSTAILQSSSGLTVIVISLIESGYLALKPAV LIIMGANIGTTLTVHLISLPIISYYSCIIISGLVVAIIGLFVNKKVFFGGLSLFCFGTAFAGLHLMTASFDLASSRNIIY NLLAFSRGNYLKGILLGALATGIVQSSSVITAITVSLARVNLINLSDAIAVTLGSNIGTCITGFLASINASIFSKRLAWG HLLFNFIGVLVLLPVIKPFIFLLDSTNTSLARQVANAHTLFNIYNLIIFLPFLNTFISVLRRGLNGDI
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=272, Percent_Identity=25.7352941176471, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 32918; Mature: 32918
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLFLTGLFFFLAGLEGSKKSLTKLALKRVELLLKKLSDNNLLSLLVGVVSTAILQSSSG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC LTVIVISLIESGYLALKPAVLIIMGANIGTTLTVHLISLPIISYYSCIIISGLVVAIIGL CHHHHHHHHHCCCCEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVNKKVFFGGLSLFCFGTAFAGLHLMTASFDLASSRNIIYNLLAFSRGNYLKGILLGALA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH TGIVQSSSVITAITVSLARVNLINLSDAIAVTLGSNIGTCITGFLASINASIFSKRLAWG HHHHCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH HLLFNFIGVLVLLPVIKPFIFLLDSTNTSLARQVANAHTLFNIYNLIIFLPFLNTFISVL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGLNGDI HHHCCCCC >Mature Secondary Structure MLLFLTGLFFFLAGLEGSKKSLTKLALKRVELLLKKLSDNNLLSLLVGVVSTAILQSSSG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC LTVIVISLIESGYLALKPAVLIIMGANIGTTLTVHLISLPIISYYSCIIISGLVVAIIGL CHHHHHHHHHCCCCEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVNKKVFFGGLSLFCFGTAFAGLHLMTASFDLASSRNIIYNLLAFSRGNYLKGILLGALA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH TGIVQSSSVITAITVSLARVNLINLSDAIAVTLGSNIGTCITGFLASINASIFSKRLAWG HHHHCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH HLLFNFIGVLVLLPVIKPFIFLLDSTNTSLARQVANAHTLFNIYNLIIFLPFLNTFISVL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGLNGDI HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]