| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931691
Identifier: 220931691
GI number: 220931691
Start: 912098
End: 913261
Strand: Direct
Name: 220931691
Synonym: Hore_08470
Alternate gene names: NA
Gene position: 912098-913261 (Clockwise)
Preceding gene: 220931690
Following gene: 220931692
Centisome position: 35.38
GC content: 34.79
Gene sequence:
>1164_bases ATGAGAAACTTAAAGATAATTGGTATTCTTTCATTGGTACTGGTAATAACAATTTCTGGAGGTGTTCTGGCTTCTGATCT GCTAGAAGGAGAGTTTAGGCTAATTTCCAGTTATTTTGAGTATTATGATGAAAGGCATCCAGGACTGACAGCAGAACTTG ATCTGATCTTTAAGAAGGCAAGTTGGTCAGATGAATTTTTATTTGAAATTAATGCTGAAGGTGATCTTAAGAATGATGGT TTTAATTGCAAACTAGGTGAAGTATATTATAAGTATTATGGTGAAAATTTTGATCTGGCTGTAGGTAGGCAGCTCTTAAG TTGGGGTACAGCAACTGAGTTCAATCCTACTGATAATATAAATCCTGTAATAGAAATGGGATTTTTCGCTGATAAAGAAC CTATACCAATGGTTCAGGGAAAGTACTATCTGGATAATAATTATACTCTGGAAGGAGTTATTATTCCTTATCATATAGCA ACAATAGATGGTATTGAAATGGATGATACTCACATAAAGGCAGATCCTGTTCCTGATAAAATGGAAAACAGCGAATATGC AGTACGATTGAGTGCTAAAGGAATTAATGGTTTTGATTATTCCCTGAGTTTTATGCATGGGTTTGAGGATTATCCTACAA TTGGTATAAAAGAGACCCCATTTGGACCTTTACCAGACCCTGCTAATATTTATTATAGAGAATATAATATCCTTGGTGCT GATTTTGCTTCCAGTTATGAAGGTATAGGTTTCTGGGGTGAAGCTGCTTATTATATGCCAGATGAAGGTGAAGATTATTA TAGTACTGTTCTTGGAGCTGATTATAAATTTGAGAATGGTCTATATCTATTAGGCCAGGCTATCTACCGTAAGGATCAAA TGCTCCAGAAAAATACCCTACTACAGGGAGCAGTAGAAAAATCACTGGCACAGATTCATACAATGAGAACAGGTCTAGTT TATAATCTGGATACAGAAGGTATTATGTTACAGCCAGAACTTGAACTTTCTTTATCTGATACAGTGACCCTTAATATAAA TTATAGATATATAGATGGTGAGCTAATGACAGGTGGTATACCTGATAATATTCCTGGCAATATTTTAATGGGTAGCAATC TAATGGAAAACAGTTTTCAAGCAAAACTCGTTTATGCATTTTAA
Upstream 100 bases:
>100_bases AGGAAGTCGAACTGTACTGAAAGTAAAAAAAGTAAGCTTTAATGAAGAGATAGATAACCATATTTTTACCACTAGATATC TTGAGAGGGGGCTATAAAAG
Downstream 100 bases:
>100_bases AAGATAATTGGATGAACAAAAAGATTTGTTTTAACATTTTGTTTTCGTACCAAAATAGCATGAAAAAAAGGAAAGAAAGA GAGTTTTTTCAAAAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MRNLKIIGILSLVLVITISGGVLASDLLEGEFRLISSYFEYYDERHPGLTAELDLIFKKASWSDEFLFEINAEGDLKNDG FNCKLGEVYYKYYGENFDLAVGRQLLSWGTATEFNPTDNINPVIEMGFFADKEPIPMVQGKYYLDNNYTLEGVIIPYHIA TIDGIEMDDTHIKADPVPDKMENSEYAVRLSAKGINGFDYSLSFMHGFEDYPTIGIKETPFGPLPDPANIYYREYNILGA DFASSYEGIGFWGEAAYYMPDEGEDYYSTVLGADYKFENGLYLLGQAIYRKDQMLQKNTLLQGAVEKSLAQIHTMRTGLV YNLDTEGIMLQPELELSLSDTVTLNINYRYIDGELMTGGIPDNIPGNILMGSNLMENSFQAKLVYAF
Sequences:
>Translated_387_residues MRNLKIIGILSLVLVITISGGVLASDLLEGEFRLISSYFEYYDERHPGLTAELDLIFKKASWSDEFLFEINAEGDLKNDG FNCKLGEVYYKYYGENFDLAVGRQLLSWGTATEFNPTDNINPVIEMGFFADKEPIPMVQGKYYLDNNYTLEGVIIPYHIA TIDGIEMDDTHIKADPVPDKMENSEYAVRLSAKGINGFDYSLSFMHGFEDYPTIGIKETPFGPLPDPANIYYREYNILGA DFASSYEGIGFWGEAAYYMPDEGEDYYSTVLGADYKFENGLYLLGQAIYRKDQMLQKNTLLQGAVEKSLAQIHTMRTGLV YNLDTEGIMLQPELELSLSDTVTLNINYRYIDGELMTGGIPDNIPGNILMGSNLMENSFQAKLVYAF >Mature_387_residues MRNLKIIGILSLVLVITISGGVLASDLLEGEFRLISSYFEYYDERHPGLTAELDLIFKKASWSDEFLFEINAEGDLKNDG FNCKLGEVYYKYYGENFDLAVGRQLLSWGTATEFNPTDNINPVIEMGFFADKEPIPMVQGKYYLDNNYTLEGVIIPYHIA TIDGIEMDDTHIKADPVPDKMENSEYAVRLSAKGINGFDYSLSFMHGFEDYPTIGIKETPFGPLPDPANIYYREYNILGA DFASSYEGIGFWGEAAYYMPDEGEDYYSTVLGADYKFENGLYLLGQAIYRKDQMLQKNTLLQGAVEKSLAQIHTMRTGLV YNLDTEGIMLQPELELSLSDTVTLNINYRYIDGELMTGGIPDNIPGNILMGSNLMENSFQAKLVYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43650; Mature: 43650
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLKIIGILSLVLVITISGGVLASDLLEGEFRLISSYFEYYDERHPGLTAELDLIFKKA CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC SWSDEFLFEINAEGDLKNDGFNCKLGEVYYKYYGENFDLAVGRQLLSWGTATEFNPTDNI CCCCEEEEEEECCCCCCCCCCCEEHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC NPVIEMGFFADKEPIPMVQGKYYLDNNYTLEGVIIPYHIATIDGIEMDDTHIKADPVPDK CCEEEECCCCCCCCCCEECCEEEECCCEEEEEEEEEEEEEEECCCEECCCEEECCCCCCC MENSEYAVRLSAKGINGFDYSLSFMHGFEDYPTIGIKETPFGPLPDPANIYYREYNILGA CCCCCEEEEEEECCCCCCCEEEHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC DFASSYEGIGFWGEAAYYMPDEGEDYYSTVLGADYKFENGLYLLGQAIYRKDQMLQKNTL CHHCCCCCCEEECCEEEECCCCCCHHHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHHH LQGAVEKSLAQIHTMRTGLVYNLDTEGIMLQPELELSLSDTVTLNINYRYIDGELMTGGI HHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCEEEECCEEEEEEEEEEECCEEEECCC PDNIPGNILMGSNLMENSFQAKLVYAF CCCCCCCEEECCCHHCCCCEEEEEEEC >Mature Secondary Structure MRNLKIIGILSLVLVITISGGVLASDLLEGEFRLISSYFEYYDERHPGLTAELDLIFKKA CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC SWSDEFLFEINAEGDLKNDGFNCKLGEVYYKYYGENFDLAVGRQLLSWGTATEFNPTDNI CCCCEEEEEEECCCCCCCCCCCEEHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC NPVIEMGFFADKEPIPMVQGKYYLDNNYTLEGVIIPYHIATIDGIEMDDTHIKADPVPDK CCEEEECCCCCCCCCCEECCEEEECCCEEEEEEEEEEEEEEECCCEECCCEEECCCCCCC MENSEYAVRLSAKGINGFDYSLSFMHGFEDYPTIGIKETPFGPLPDPANIYYREYNILGA CCCCCEEEEEEECCCCCCCEEEHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC DFASSYEGIGFWGEAAYYMPDEGEDYYSTVLGADYKFENGLYLLGQAIYRKDQMLQKNTL CHHCCCCCCEEECCEEEECCCCCCHHHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHHH LQGAVEKSLAQIHTMRTGLVYNLDTEGIMLQPELELSLSDTVTLNINYRYIDGELMTGGI HHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCEEEECCEEEEEEEEEEECCEEEECCC PDNIPGNILMGSNLMENSFQAKLVYAF CCCCCCCEEECCCHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA