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The map label for this gene is yqiI [H]

Identifier: 220931638

GI number: 220931638

Start: 854778

End: 855929

Strand: Reverse

Name: yqiI [H]

Synonym: Hore_07940

Alternate gene names: 220931638

Gene position: 855929-854778 (Counterclockwise)

Preceding gene: 220931651

Following gene: 220931594

Centisome position: 33.2

GC content: 35.59

Gene sequence:

>1152_bases
ATGTTTCTTATATTAAAGTTGAATAAAAAAATTATTGGTTTGCTGCTAGGTGGTATTGTTCTTGCAACCCTTTTATATTT
TAGTCTCCATTCTATTCCAACCAATACTAAGGATATGGTTTTTAAAGTCGTAGTTGATCCAGGACATGGGAGTATAGATA
CAGGAACCCACCATGGTAATATATTTGAAAAAGATATTAACCTTGAAATAGCCAGACATCTGGTAGATGAACTTAAAAAA
GTAAATATAATTCCTATAATGACCAGAAATGAAGACAAACTTTACCAGAATGACAGGAATAAAGACCTGAAACATAGACC
GGAGATTGCCAGAGAATATCAAGCCGATCTATTTATCAGTATTCATATAAATAATTTTCCTACCAGTCAACCCTCGGGTA
GTCAGGTATTCTATAAACCTGACTCTTCTGAAAGTAAAGAGCTGGCAAAATACATTCATGAAGAACTGGTCATGATCAGG
CAGGAAAATAATAGAAGCCTTAGTAAAGGGAATTATTATGTACTGAAACAATCCCCCTGCCCGGCAGTCTTAATAGAGGC
AGGCTTTATCTCAAACCCGGTTGATCGTAAAAAATTAACTGATCCTGAATACCAGAAAAATCTGGCCCGGGCAATTACAA
AAGGAATTATTAATTATTTACAATCAAGTTTTGGTAATCCTGAAAAACCAACAACAGATGGTACTCCAACCATAAAAAAA
GACAAAAAAGGAATGTTTACATATTATATAGGGACTTACAACGGAGCAATGTTTCTGGTCCGCAAAGAACTCTCATATCC
AACTGCTGTCCTCTTAAACAAAAAATACAGTGGCCTGAAACTAAACGAAATAATGGCCATTCATGCCTTAAATCAGCTCA
AAACATCTCCCGATGGACTTGTATCACCCCTGCCTAAGGGGACCAGAATAAAATCCCTGACAGTTAAAAGAAATGTGGCT
GTAGTTAACTTCTCCAGAGAACTAAAAGAAAATTTTAAAGGAGGTGGCGGCCTGGAAAATTATACAGTTGAAGCTATAAC
CAGAACCCTTTTTTCAGTTCCTGGTATTGAAGCCATAGATATTTTAATAGAAGGTGAAACAAATCAAACTATAGGGGGTC
ATATAATCCTGAATAGAATTATAAAAGATTAG

Upstream 100 bases:

>100_bases
AATCATAGGTAAAATTATAAAGGATTAAAAACGGGTGTATATTTACAGAGAAACACTATTACAAAAAATTATAAAAACTC
TACAAAAACGGAGGTAAATT

Downstream 100 bases:

>100_bases
TCATTTATAAATAAAAATCACCTTAGATATTTTTTAAACTTTACAATTATATATTTTAAAAAGTTTTATAGAATATCTTC
TTAAGACAATATTACTTTGC

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFLILKLNKKIIGLLLGGIVLATLLYFSLHSIPTNTKDMVFKVVVDPGHGSIDTGTHHGNIFEKDINLEIARHLVDELKK
VNIIPIMTRNEDKLYQNDRNKDLKHRPEIAREYQADLFISIHINNFPTSQPSGSQVFYKPDSSESKELAKYIHEELVMIR
QENNRSLSKGNYYVLKQSPCPAVLIEAGFISNPVDRKKLTDPEYQKNLARAITKGIINYLQSSFGNPEKPTTDGTPTIKK
DKKGMFTYYIGTYNGAMFLVRKELSYPTAVLLNKKYSGLKLNEIMAIHALNQLKTSPDGLVSPLPKGTRIKSLTVKRNVA
VVNFSRELKENFKGGGGLENYTVEAITRTLFSVPGIEAIDILIEGETNQTIGGHIILNRIIKD

Sequences:

>Translated_383_residues
MFLILKLNKKIIGLLLGGIVLATLLYFSLHSIPTNTKDMVFKVVVDPGHGSIDTGTHHGNIFEKDINLEIARHLVDELKK
VNIIPIMTRNEDKLYQNDRNKDLKHRPEIAREYQADLFISIHINNFPTSQPSGSQVFYKPDSSESKELAKYIHEELVMIR
QENNRSLSKGNYYVLKQSPCPAVLIEAGFISNPVDRKKLTDPEYQKNLARAITKGIINYLQSSFGNPEKPTTDGTPTIKK
DKKGMFTYYIGTYNGAMFLVRKELSYPTAVLLNKKYSGLKLNEIMAIHALNQLKTSPDGLVSPLPKGTRIKSLTVKRNVA
VVNFSRELKENFKGGGGLENYTVEAITRTLFSVPGIEAIDILIEGETNQTIGGHIILNRIIKD
>Mature_383_residues
MFLILKLNKKIIGLLLGGIVLATLLYFSLHSIPTNTKDMVFKVVVDPGHGSIDTGTHHGNIFEKDINLEIARHLVDELKK
VNIIPIMTRNEDKLYQNDRNKDLKHRPEIAREYQADLFISIHINNFPTSQPSGSQVFYKPDSSESKELAKYIHEELVMIR
QENNRSLSKGNYYVLKQSPCPAVLIEAGFISNPVDRKKLTDPEYQKNLARAITKGIINYLQSSFGNPEKPTTDGTPTIKK
DKKGMFTYYIGTYNGAMFLVRKELSYPTAVLLNKKYSGLKLNEIMAIHALNQLKTSPDGLVSPLPKGTRIKSLTVKRNVA
VVNFSRELKENFKGGGGLENYTVEAITRTLFSVPGIEAIDILIEGETNQTIGGHIILNRIIKD

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788776, Length=239, Percent_Identity=28.8702928870293, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI87082163, Length=230, Percent_Identity=28.2608695652174, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 43025; Mature: 43025

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLILKLNKKIIGLLLGGIVLATLLYFSLHSIPTNTKDMVFKVVVDPGHGSIDTGTHHGN
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
IFEKDINLEIARHLVDELKKVNIIPIMTRNEDKLYQNDRNKDLKHRPEIAREYQADLFIS
EEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHCCEEEEE
IHINNFPTSQPSGSQVFYKPDSSESKELAKYIHEELVMIRQENNRSLSKGNYYVLKQSPC
EEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
PAVLIEAGFISNPVDRKKLTDPEYQKNLARAITKGIINYLQSSFGNPEKPTTDGTPTIKK
CEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DKKGMFTYYIGTYNGAMFLVRKELSYPTAVLLNKKYSGLKLNEIMAIHALNQLKTSPDGL
CCCCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
VSPLPKGTRIKSLTVKRNVAVVNFSRELKENFKGGGGLENYTVEAITRTLFSVPGIEAID
CCCCCCCCEEEEEEEECCEEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
ILIEGETNQTIGGHIILNRIIKD
EEEECCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFLILKLNKKIIGLLLGGIVLATLLYFSLHSIPTNTKDMVFKVVVDPGHGSIDTGTHHGN
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
IFEKDINLEIARHLVDELKKVNIIPIMTRNEDKLYQNDRNKDLKHRPEIAREYQADLFIS
EEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHCCCCCCCCCCHHHHHHHCCEEEEE
IHINNFPTSQPSGSQVFYKPDSSESKELAKYIHEELVMIRQENNRSLSKGNYYVLKQSPC
EEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
PAVLIEAGFISNPVDRKKLTDPEYQKNLARAITKGIINYLQSSFGNPEKPTTDGTPTIKK
CEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DKKGMFTYYIGTYNGAMFLVRKELSYPTAVLLNKKYSGLKLNEIMAIHALNQLKTSPDGL
CCCCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
VSPLPKGTRIKSLTVKRNVAVVNFSRELKENFKGGGGLENYTVEAITRTLFSVPGIEAID
CCCCCCCCEEEEEEEECCEEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
ILIEGETNQTIGGHIILNRIIKD
EEEECCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]