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The map label for this gene is rimP

Identifier: 220931625

GI number: 220931625

Start: 840250

End: 840729

Strand: Direct

Name: rimP

Synonym: Hore_07810

Alternate gene names: 220931625

Gene position: 840250-840729 (Clockwise)

Preceding gene: 220931624

Following gene: 220931626

Centisome position: 32.59

GC content: 37.92

Gene sequence:

>480_bases
ATGGGGAAAATAACTGACAGGGTAGAAGACCTGGCCCAGCCAATTGTCGAATCCCAGGGCCTTGAACTGGTAGATGTAGA
ATATGTTAAAGAAGGAGAGAACCGGGTTTTAAGGGTGTTTATTGAAAATCCGGAGGGTGAGGTTACTCTGGATCACTGTG
AAAATGTGAGTAAGAATTTAGATGAAAAACTGGATGAAGTAGACCCTATTCAAGAGAGTTACATACTTGAAGTATCATCG
CCAGGTATTGAAAGACCCCTCAAGAAAAAAGAGGATTTCGATAGGTTCTCCGGTAAACTGGCCTATATTAAGACATTTGC
TCCTGTTTCCGGTAATAAAGAAATTACCGGTATAATAAAAGGAAGAGATGGAGACAACATTAAAGTTCTTAAAAAAGATG
ATGATAAAGAACTGGAAATACCTTTTTCACAGATTGCTAAAGCCCATTTAATGGTTGATTTTGATAATATTACAGGTTAG

Upstream 100 bases:

>100_bases
ACTCTTTAATTATGAGTAGAAACTATTTGGATAATAGTTATTTTTAGATGGGTTACAATATTATTATAAAATTTGTTTTT
CCAGGAAAGGAGTATTTACT

Downstream 100 bases:

>100_bases
ATAATGTTGCAAGTTTTTTATAAGGAGGAATTGGAATGAATATTGAATTTTTACATGCGCTGGATGATATTGAAAAAGAA
AAAGGAATATCCAAGGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGKITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNLDEKLDEVDPIQESYILEVSS
PGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIKGRDGDNIKVLKKDDDKELEIPFSQIAKAHLMVDFDNITG

Sequences:

>Translated_159_residues
MGKITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNLDEKLDEVDPIQESYILEVSS
PGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIKGRDGDNIKVLKKDDDKELEIPFSQIAKAHLMVDFDNITG
>Mature_158_residues
GKITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNLDEKLDEVDPIQESYILEVSSP
GIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIKGRDGDNIKVLKKDDDKELEIPFSQIAKAHLMVDFDNITG

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=154, Percent_Identity=33.7662337662338, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_HALOH (B8CW69)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002508533.1
- ProteinModelPortal:   B8CW69
- SMR:   B8CW69
- GeneID:   7314768
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_07810
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17932; Mature: 17801

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNL
CCCHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCCCEEHHHHHHHHHHH
DEKLDEVDPIQESYILEVSSPGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIK
HHHHHHCCCCCHHEEEEECCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEE
GRDGDNIKVLKKDDDKELEIPFSQIAKAHLMVDFDNITG
CCCCCCEEEEECCCCCEEECCHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
GKITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNL
CCHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCCCEEHHHHHHHHHHH
DEKLDEVDPIQESYILEVSSPGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIK
HHHHHHCCCCCHHEEEEECCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEE
GRDGDNIKVLKKDDDKELEIPFSQIAKAHLMVDFDNITG
CCCCCCEEEEECCCCCEEECCHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA