| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is ytvI [H]
Identifier: 220931616
GI number: 220931616
Start: 827639
End: 828706
Strand: Direct
Name: ytvI [H]
Synonym: Hore_07720
Alternate gene names: 220931616
Gene position: 827639-828706 (Clockwise)
Preceding gene: 220931615
Following gene: 220931617
Centisome position: 32.1
GC content: 33.99
Gene sequence:
>1068_bases ATGGAAAAATGGTTAAAAAGGTTATTAATATATAGTGTTGTTTTTGTAATCGGGGTTATTTTATTAAAATATTTTTTTAT ATATTTCAGCCCGTTTATAATTGCAGCAATTCTGGCAAGTTTAATAAATCCTGTGGTTGATCGTCTTGATGAGAAGATAC CTGTCAACAGGGGTTTAGCTGTTATTATAGTGTTGGTCCTGTTAATCAGTATTTTGGTTCTTATTATTATCCTGGGGGTC TCCCAGATTTATCTTGAATTAAACAGATTACTCCAAAATTTGCCTGATTACAGTACCTTCGGGAGTAAATTCCACTGGAT AGTCCAACAAAATTACAGGCTTCAGGAGTTTATTCAGGAGCTTGATATTTCACCTTCTGTTAAAGATGCACTTAACAACA ATCTTCAGATGATCTATAATGCCATAAAAAACGGTCTGGTAAAAGGAATTAATGGAACTTTAAACCTCCTGGGCAAACTT CCTATGTTATTAACAATTCTATTTTTAAGTTTTATTGCTACATATTTTATTAGCAGGGATAAAGATAAAATAAATCAATT TATAATGAAATTGTTTCCCGGGGAATTAAAACCCAAAGTCTTTAAAGTTGAAAAGGAGCTTATAAACTCAGCCATGGGCT TTATCCGGGCTGAATTAATATTAATTACAATTACAGGAATAATATCAGGGGTAGGTCTGGCTATTATCGGTAATCATTAC GCTCTAATAATTGGTATAAGTTCAGCCTTGCTTGATTTAATACCAATCATTGGTCCTGCCTTAATATTTATACCCTGGAT TATTTATAATATGATCATGGGAAATTTAAGTTATGCCTTTGGCTTATTGGTAGTTTATACATTGATGGCTGCAGTAAGAC AGGGAGCTGAAGGGAAGGTAATGGGGGACAATCTTGGTGTGCACCCACTGGCTACTATGATAGCCCTGTATGTTGGTTAC CGGGTTATGGGGATGATTGGTTTTATTATGGGTCCTGCTATTTTAGTAATTATTAAGGCTTTGATTAATGCAGAAATTAT ACCACCTGATAAAAAAATAAAGGGGTGA
Upstream 100 bases:
>100_bases TGGGATTCTGGATAGATTTGATAGCCTTCTGTTTACTGTTCCGTTTACATACTACTTTATTATGTACTGGTTATAAATTA CCCTGAAATGAGGGGTTATT
Downstream 100 bases:
>100_bases AATAATGAAAAAGAAATTAGTTGTCCTGGGTTCAACTGGCTCAATCGGAACCCAGACCCTTGAAGTTCTCTCCCATCTTG AAGACCAGTGGGAGATTCTG
Product: Sporulation integral membrane protein YtvI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MEKWLKRLLIYSVVFVIGVILLKYFFIYFSPFIIAAILASLINPVVDRLDEKIPVNRGLAVIIVLVLLISILVLIIILGV SQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQELDISPSVKDALNNNLQMIYNAIKNGLVKGINGTLNLLGKL PMLLTILFLSFIATYFISRDKDKINQFIMKLFPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHY ALIIGISSALLDLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGAEGKVMGDNLGVHPLATMIALYVGY RVMGMIGFIMGPAILVIIKALINAEIIPPDKKIKG
Sequences:
>Translated_355_residues MEKWLKRLLIYSVVFVIGVILLKYFFIYFSPFIIAAILASLINPVVDRLDEKIPVNRGLAVIIVLVLLISILVLIIILGV SQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQELDISPSVKDALNNNLQMIYNAIKNGLVKGINGTLNLLGKL PMLLTILFLSFIATYFISRDKDKINQFIMKLFPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHY ALIIGISSALLDLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGAEGKVMGDNLGVHPLATMIALYVGY RVMGMIGFIMGPAILVIIKALINAEIIPPDKKIKG >Mature_355_residues MEKWLKRLLIYSVVFVIGVILLKYFFIYFSPFIIAAILASLINPVVDRLDEKIPVNRGLAVIIVLVLLISILVLIIILGV SQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQELDISPSVKDALNNNLQMIYNAIKNGLVKGINGTLNLLGKL PMLLTILFLSFIATYFISRDKDKINQFIMKLFPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHY ALIIGISSALLDLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGAEGKVMGDNLGVHPLATMIALYVGY RVMGMIGFIMGPAILVIIKALINAEIIPPDKKIKG
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014227 - InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 39519; Mature: 39519
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKWLKRLLIYSVVFVIGVILLKYFFIYFSPFIIAAILASLINPVVDRLDEKIPVNRGLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH VIIVLVLLISILVLIIILGVSQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCHHHHHHHH LDISPSVKDALNNNLQMIYNAIKNGLVKGINGTLNLLGKLPMLLTILFLSFIATYFISRD CCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDKINQFIMKLFPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALIIGISSALLDLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGAEGKV HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE MGDNLGVHPLATMIALYVGYRVMGMIGFIMGPAILVIIKALINAEIIPPDKKIKG ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEKWLKRLLIYSVVFVIGVILLKYFFIYFSPFIIAAILASLINPVVDRLDEKIPVNRGLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH VIIVLVLLISILVLIIILGVSQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCHHHHHHHH LDISPSVKDALNNNLQMIYNAIKNGLVKGINGTLNLLGKLPMLLTILFLSFIATYFISRD CCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDKINQFIMKLFPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ALIIGISSALLDLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGAEGKV HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE MGDNLGVHPLATMIALYVGYRVMGMIGFIMGPAILVIIKALINAEIIPPDKKIKG ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]