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The map label for this gene is cheD [H]

Identifier: 220931608

GI number: 220931608

Start: 821587

End: 822063

Strand: Direct

Name: cheD [H]

Synonym: Hore_07640

Alternate gene names: 220931608

Gene position: 821587-822063 (Clockwise)

Preceding gene: 220931607

Following gene: 220931609

Centisome position: 31.87

GC content: 39.2

Gene sequence:

>477_bases
ATGAGTTCTACCCCAATCAGGGTACGCATGGCAGAATTTGCTATCGGGAAATCCCCGGACATTCTGGTTACGATAGGTCT
GGGCTCCTGTGTTGGGGTAGCTATTTATGATAGGTATAACAATATAGGTGGCCTTATCCATATTATGCTACCTGAAAACA
AAAAGGGCTTAAAACCTGCTAAATATGCCGATACCGGTATTCCATTACTGATAAAAAAGATGGAGGAAGAGGGTGCTAAA
AGAAGAAATATGGTCGCCAAAATTGCCGGAGGCTCACATATGTTCTCCAATGGAGATGACAATGGATTAAATGTGGGAAG
CCGCAATATAAAAGCGGTCAGGGAAATACTTGCAGAACAAAATATCGACATTGTTGGTGAAGATGTCGGTAAAACATATG
GTAGAACGATGGAATTCCATACTGAAGATGGTAAGGTGATTATTAAATCTTATAAAATGGGTAAAAAAATATTATAA

Upstream 100 bases:

>100_bases
AATTTCTGGACGGAGGCAATGAAATAGAAGGTTATTTTATTTTAATTCCTGATCCGGGTTCTTTAGACAAAATATTAAAG
GCCCTGGGGTTTGATGTGAA

Downstream 100 bases:

>100_bases
TAATATATACCGGTTTGCTTTCAGGAAAATATTTTTATTTTGCCTCATTTATTTTTAATATAAACCCATTGATAAATATC
TTTTTATGTGGTATACTACC

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSSTPIRVRMAEFAIGKSPDILVTIGLGSCVGVAIYDRYNNIGGLIHIMLPENKKGLKPAKYADTGIPLLIKKMEEEGAK
RRNMVAKIAGGSHMFSNGDDNGLNVGSRNIKAVREILAEQNIDIVGEDVGKTYGRTMEFHTEDGKVIIKSYKMGKKIL

Sequences:

>Translated_158_residues
MSSTPIRVRMAEFAIGKSPDILVTIGLGSCVGVAIYDRYNNIGGLIHIMLPENKKGLKPAKYADTGIPLLIKKMEEEGAK
RRNMVAKIAGGSHMFSNGDDNGLNVGSRNIKAVREILAEQNIDIVGEDVGKTYGRTMEFHTEDGKVIIKSYKMGKKIL
>Mature_157_residues
SSTPIRVRMAEFAIGKSPDILVTIGLGSCVGVAIYDRYNNIGGLIHIMLPENKKGLKPAKYADTGIPLLIKKMEEEGAKR
RNMVAKIAGGSHMFSNGDDNGLNVGSRNIKAVREILAEQNIDIVGEDVGKTYGRTMEFHTEDGKVIIKSYKMGKKIL

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 17250; Mature: 17119

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTPIRVRMAEFAIGKSPDILVTIGLGSCVGVAIYDRYNNIGGLIHIMLPENKKGLKPA
CCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
KYADTGIPLLIKKMEEEGAKRRNMVAKIAGGSHMFSNGDDNGLNVGSRNIKAVREILAEQ
CCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHC
NIDIVGEDVGKTYGRTMEFHTEDGKVIIKSYKMGKKIL
CCCEEECHHHHHCCCEEEEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SSTPIRVRMAEFAIGKSPDILVTIGLGSCVGVAIYDRYNNIGGLIHIMLPENKKGLKPA
CCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
KYADTGIPLLIKKMEEEGAKRRNMVAKIAGGSHMFSNGDDNGLNVGSRNIKAVREILAEQ
CCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHC
NIDIVGEDVGKTYGRTMEFHTEDGKVIIKSYKMGKKIL
CCCEEECHHHHHCCCEEEEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA