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The map label for this gene is smf [H]

Identifier: 220931596

GI number: 220931596

Start: 809176

End: 810405

Strand: Direct

Name: smf [H]

Synonym: Hore_07520

Alternate gene names: 220931596

Gene position: 809176-810405 (Clockwise)

Preceding gene: 220931595

Following gene: 220931597

Centisome position: 31.39

GC content: 35.85

Gene sequence:

>1230_bases
ATGAAAATGTACCAAAAAATGGAGGAAGTTGCAGGTATTTTTAAACATGTTAATGAATATTATATAAAACAATCTAAGGA
TGGGGATAAAATGCCAGAAAGAGTATATTTATTAGCCCTTACAATGATAAATGGACTGGGTATTCTTAGAATACAGAATT
TATTGAATTACTTTGGAAGTGCTTCTTCAATATGGCAGGCCAGTGAAAAAGAATTGAAACAGGTTAATGGAATTAACAAA
CTTGCTGAAAAGATTGTTAAGCAGAGAAAAAAAATTAATATTGAAAATATACTTGAGAATCTTGCTAAAAATAATATTAA
ATATGTGACCATATTTGATAACAATTATCCAGATAAATTAAGAGATATTAGTAAACCACCCCCTGTTATTTATTATAAAG
GGAAATATGATAATAATGAAAGAATCATTGCCATTGTAGGTTCGAGGAGGGCTACCCGATATGGATGTAATATTGCCAGA
AACCTGGCCTATAGTCTGGCCGGTAGGGGGTTTGCCATTATCAGTGGATTTGCCAGGGGAATTGATACCTGTGCCCATAA
GGGTGCTTTAAAGGTCGGGGGCAGGACCATTGCTGTCCTGGGAACAGGTTTAAATAGGATATACCCACCCGAAAACAAAA
AACTGACTGGTCTGGTGACTGATTCTGGTTATCTTTTAAGTGAACTTACCCCTGAGACCGGACCCCTTGCCAGTAATTTT
CCCAGGAGAAATAGAATTATAAGCGGGCTGGCAGAAGGGGTAATAGTGGTTGAAGCCTCCAATAGAAGTGGTTCCCTGAT
AACTGCCAATTACGCCCGGAAGCAGGGAAAATTTATATTTTCTGTACCTGGTAATATTAACCGTCCCCAGAGTCAGGGGA
CCAACAATCTAATTAAGAAAGGTGCCCGGGTACTAACATCTGTTGACGATGTTTTAAACACACTGCCAACGGCAGAAAAA
CCATTAATAAAATCATATAATCGAAAAAATACAGGAGATAAAAGTACGGTAACTGAAGATTATAGCAGTTTATCTCCGGA
GGAGAAAAAAGTTGTTTCAATTTTACAAGGAGAAGACTTACACATAAATCAGATTATTACATTGACAGGTTTTGACGCAT
CTCAGGTTAACAAAATTCTCTTAAATCTTGAATTAAAAGGACTTATATCCCCTAAACAGGGAAAAAAATATACATTTTTG
GGTTTACAAAATCTTTTAAAACCAATATAA

Upstream 100 bases:

>100_bases
CTAAATCACACTAAACCGCAGTAATATTACTGCGGTTTTTCAGTTAAAATTAATTTCATAAAAATATTTATATAGTTTTT
GATTAAATAAACTACCATTA

Downstream 100 bases:

>100_bases
TTATATATTAGTTATGAAATTGTAGGTGTCAACCCTGGAAAGAGAAGGGAGGCAGACAGGTTATTCCTGTTAATCAAATA
TGAAACAGGCAGTTATTGAA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKMYQKMEEVAGIFKHVNEYYIKQSKDGDKMPERVYLLALTMINGLGILRIQNLLNYFGSASSIWQASEKELKQVNGINK
LAEKIVKQRKKINIENILENLAKNNIKYVTIFDNNYPDKLRDISKPPPVIYYKGKYDNNERIIAIVGSRRATRYGCNIAR
NLAYSLAGRGFAIISGFARGIDTCAHKGALKVGGRTIAVLGTGLNRIYPPENKKLTGLVTDSGYLLSELTPETGPLASNF
PRRNRIISGLAEGVIVVEASNRSGSLITANYARKQGKFIFSVPGNINRPQSQGTNNLIKKGARVLTSVDDVLNTLPTAEK
PLIKSYNRKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDLHINQIITLTGFDASQVNKILLNLELKGLISPKQGKKYTFL
GLQNLLKPI

Sequences:

>Translated_409_residues
MKMYQKMEEVAGIFKHVNEYYIKQSKDGDKMPERVYLLALTMINGLGILRIQNLLNYFGSASSIWQASEKELKQVNGINK
LAEKIVKQRKKINIENILENLAKNNIKYVTIFDNNYPDKLRDISKPPPVIYYKGKYDNNERIIAIVGSRRATRYGCNIAR
NLAYSLAGRGFAIISGFARGIDTCAHKGALKVGGRTIAVLGTGLNRIYPPENKKLTGLVTDSGYLLSELTPETGPLASNF
PRRNRIISGLAEGVIVVEASNRSGSLITANYARKQGKFIFSVPGNINRPQSQGTNNLIKKGARVLTSVDDVLNTLPTAEK
PLIKSYNRKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDLHINQIITLTGFDASQVNKILLNLELKGLISPKQGKKYTFL
GLQNLLKPI
>Mature_409_residues
MKMYQKMEEVAGIFKHVNEYYIKQSKDGDKMPERVYLLALTMINGLGILRIQNLLNYFGSASSIWQASEKELKQVNGINK
LAEKIVKQRKKINIENILENLAKNNIKYVTIFDNNYPDKLRDISKPPPVIYYKGKYDNNERIIAIVGSRRATRYGCNIAR
NLAYSLAGRGFAIISGFARGIDTCAHKGALKVGGRTIAVLGTGLNRIYPPENKKLTGLVTDSGYLLSELTPETGPLASNF
PRRNRIISGLAEGVIVVEASNRSGSLITANYARKQGKFIFSVPGNINRPQSQGTNNLIKKGARVLTSVDDVLNTLPTAEK
PLIKSYNRKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDLHINQIITLTGFDASQVNKILLNLELKGLISPKQGKKYTFL
GLQNLLKPI

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=325, Percent_Identity=36, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 45393; Mature: 45393

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMYQKMEEVAGIFKHVNEYYIKQSKDGDKMPERVYLLALTMINGLGILRIQNLLNYFGS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
ASSIWQASEKELKQVNGINKLAEKIVKQRKKINIENILENLAKNNIKYVTIFDNNYPDKL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHH
RDISKPPPVIYYKGKYDNNERIIAIVGSRRATRYGCNIARNLAYSLAGRGFAIISGFARG
HHCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
IDTCAHKGALKVGGRTIAVLGTGLNRIYPPENKKLTGLVTDSGYLLSELTPETGPLASNF
HHHHHHCCCEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCC
PRRNRIISGLAEGVIVVEASNRSGSLITANYARKQGKFIFSVPGNINRPQSQGTNNLIKK
CHHHHHHHHHHCCEEEEEECCCCCCEEEEHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
GARVLTSVDDVLNTLPTAEKPLIKSYNRKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDL
HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCE
HINQIITLTGFDASQVNKILLNLELKGLISPKQGKKYTFLGLQNLLKPI
EEEEEEEEECCCHHHHHHHHEEEEEEECCCCCCCCEEEEECHHHHHCCC
>Mature Secondary Structure
MKMYQKMEEVAGIFKHVNEYYIKQSKDGDKMPERVYLLALTMINGLGILRIQNLLNYFGS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
ASSIWQASEKELKQVNGINKLAEKIVKQRKKINIENILENLAKNNIKYVTIFDNNYPDKL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHH
RDISKPPPVIYYKGKYDNNERIIAIVGSRRATRYGCNIARNLAYSLAGRGFAIISGFARG
HHCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
IDTCAHKGALKVGGRTIAVLGTGLNRIYPPENKKLTGLVTDSGYLLSELTPETGPLASNF
HHHHHHCCCEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCC
PRRNRIISGLAEGVIVVEASNRSGSLITANYARKQGKFIFSVPGNINRPQSQGTNNLIKK
CHHHHHHHHHHCCEEEEEECCCCCCEEEEHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
GARVLTSVDDVLNTLPTAEKPLIKSYNRKNTGDKSTVTEDYSSLSPEEKKVVSILQGEDL
HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCE
HINQIITLTGFDASQVNKILLNLELKGLISPKQGKKYTFLGLQNLLKPI
EEEEEEEEECCCHHHHHHHHEEEEEEECCCCCCCCEEEEECHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]