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The map label for this gene is 220931575

Identifier: 220931575

GI number: 220931575

Start: 790995

End: 791222

Strand: Direct

Name: 220931575

Synonym: Hore_07310

Alternate gene names: NA

Gene position: 790995-791222 (Clockwise)

Preceding gene: 220931574

Following gene: 220931576

Centisome position: 30.68

GC content: 40.79

Gene sequence:

>228_bases
ATGAAGGAACTGGTTGAAACAATTGCAAAGGCTATAGTTGATAATCCTGAGATGGTCAGGGTAAATCAGGTAGAAGGTGA
AAAATCAATAATACTTGAACTGTCAGTTGCTGAAGACGATATGGGTAAAGTTATTGGAAAACAGGGCCGGATTGCCCGGG
CTATCAGGACTGTTGTCAAGGCTGCTGCCACCAAGGAAGGTAAAAAAGTAATTGTCGATATTCAATAA

Upstream 100 bases:

>100_bases
AAAATGGTGCTCAGCCTTCCAACACCGTCCGTAGCTTATTGAAAAAGACCGGTGTTTTGGCTAAATTTAGAGAACAGCAA
CAGTAAAGGAGGATTAACAA

Downstream 100 bases:

>100_bases
ACCAGAGAATGAGATGGTGAGGCCCCGTGAACGATAAAATGATTACTATAGGTAAGGTCACAACCCATCAGGGTAATAAA
GGGGAGGTAAGGGTCTTACC

Product: nucleic acid binding protein, containing KH domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKELVETIAKAIVDNPEMVRVNQVEGEKSIILELSVAEDDMGKVIGKQGRIARAIRTVVKAAATKEGKKVIVDIQ

Sequences:

>Translated_75_residues
MKELVETIAKAIVDNPEMVRVNQVEGEKSIILELSVAEDDMGKVIGKQGRIARAIRTVVKAAATKEGKKVIVDIQ
>Mature_75_residues
MKELVETIAKAIVDNPEMVRVNQVEGEKSIILELSVAEDDMGKVIGKQGRIARAIRTVVKAAATKEGKKVIVDIQ

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8173; Mature: 8173

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELVETIAKAIVDNPEMVRVNQVEGEKSIILELSVAEDDMGKVIGKQGRIARAIRTVVK
CHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHH
AAATKEGKKVIVDIQ
HHHCCCCCEEEEEEC
>Mature Secondary Structure
MKELVETIAKAIVDNPEMVRVNQVEGEKSIILELSVAEDDMGKVIGKQGRIARAIRTVVK
CHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHH
AAATKEGKKVIVDIQ
HHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]